BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZH06RM1.SCF screened BAC_end (1003 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1739 1219 0.0 >3x_Contig1739 Length = 22061 Score = 1219 bits (615), Expect = 0.0 Identities = 647/655 (98%), Gaps = 2/655 (0%) Strand = Plus / Plus Query: 53 aaagttgcgaagctccatagaagagaagtttgtaataatcatagaatctctcattacctc 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10332 aaagttgcgaagctccatagaagagaagtttgtaataatcatagaatctctcattacctc 10391 Query: 113 ttgagctggatttgttctgtttcattaattcacttttctcaaatgctagcatgtacatgg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10392 ttgagctggatttgttctgtttcattaattcacttttctcaaatgctagcatgtacatgg 10451 Query: 173 gcaaagttttcaaagaatctggtaagattaattgccccccagaatatcctccacacagtg 232 |||||||||||||||||||||||||||||||||||||||||||| | || |||||||||| Sbjct: 10452 gcaaagttttcaaagaatctggtaagattaattgccccccagaagaaccgccacacagtg 10511 Query: 233 ctctgtattgtgtaaagatttcaatgatcttgcggtcaatgttcttcctaatttcattga 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10512 ctctgtattgtgtaaagatttcaatgatcttgcggtcaatgttcttcctaatttcattga 10571 Query: 293 aattacagtcttccaatgtggctagcacatctttgatcattatgctactcaccacatctt 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10572 aattacagtcttccaatgtggctagcacatctttgatcattatgctactcaccacatctt 10631 Query: 353 ggtttataaacttgaagacttcgattacgttcgagttgacagctgcattagtattaattg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10632 ggtttataaacttgaagacttcgattacgttcgagttgacagctgcattagtattaattg 10691 Query: 413 cacgtactttacgtacaccatcgatatcagtatacaatagagctgcttggaagcatatat 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10692 cacgtactttacgtacaccatcgatatcagtatacaatagagctgcttggaagcatatat 10751 Query: 473 cttctccgacctttagagtgtcatcgtacttgaatagcacgtcgaacttttgatctctgg 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10752 cttctccgacctttagagtgtcatcgtacttgaatagcacgtcgaacttttgatctctgg 10811 Query: 533 tgagtacagggattacagggtcctcatcagtattctttacactctccgaataatagttgt 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10812 tgagtacagggattacagggtcctcatcagtattctttacactctccgaataatagttgt 10871 Query: 593 aaactgacagtcccgtagaacaacgcacttttagcataccttgatacccgactgtgcatt 652 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10872 aaactgacagtccggaggaacaacgcacttttagcataccttgatacccgactgtgcatt 10931 Query: 653 tcacactccctaaaatgtcattaacaaatttgaaattcatcctttattgatgttg 707 |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 10932 tcacactccctaaaatgtcattaacaaatttg-aattcatcc-ttattgatgttg 10984 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8760 Number of Sequences: 1807 Number of extensions: 8760 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 1003 length of database: 10,358,551 effective HSP length: 16 effective length of query: 987 effective length of database: 10,329,639 effective search space: 10195353693 effective search space used: 10195353693 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)