BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZH07RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig847 1407 0.0 >3x_Contig847 Length = 2949 Score = 1407 bits (710), Expect = 0.0 Identities = 787/806 (97%), Gaps = 5/806 (0%) Strand = Plus / Plus Query: 45 ctttacagtctctaaccaaatcaccatctttagtgataacaatttcagtttcaggattct 104 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 ctttacagtctctaactatatcaccatctttagtgataacaatttcagtttcaggattct 67 Query: 105 tacaggatccacaaaggacaaacttagtgatgaaaccatccaatacgtcctgtaatttgg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 tacaggatccacaaaggacaaacttagtgatgaaaccatccaatacgtcctgtaatttgg 127 Query: 165 ctggttgatgagcaccattgacaatgtaacgatcattttcaacattgatagcagtttggg 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ctggttgatgagcaccattgacaatgtaacgatcattttcaacattgatagcagtttggg 187 Query: 225 cacccaattcaaacccgaaatatttgatgatgtatggagctggtctgtttaaagcacggg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 cacccaattcaaacccgaaatatttgatgatgtatggagctggtctgtttaaagcacggg 247 Query: 285 caacatccatggtattcataacaacagttttgataccattacctctaccttcaatcttag 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 caacatccatggtattcataacaacagttttgataccattacctctaccttcaatcttag 307 Query: 345 cctgaattggaggcattttataacggtagaaagggtcattgttgtctctgcaaatattga 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 cctgaattggaggcattttataacggtagaaagggtcattgttgtctctgcaaatattga 367 Query: 405 ttgacatcttcggctactgttactaatctctagtcacttgtttctgctaccaccgtgtct 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 ttgacatcttcggctactgttactaatctctagtcacttgtttctgctaccaccgtgtct 427 Query: 465 ttgacgttcttcaagtctggaaaacacaaaaacttttaaaagtaagttcgaactgatcct 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ttgacgttcttcaagtctggaaaacacaaaaacttttaaaagtaagttcgaactgatcct 487 Query: 525 gtattggactgtaaaacggggtcattaacgccttctttgat-atgtatatggaagaagtt 583 ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 488 gtattggactgtaaaacggggtcattaacgccttcttgaatcatgtatatggaagaagtt 547 Query: 584 catctcatctcttagaagttcaacttcaactcttcgcgtgtggcaatcagatactgaggc 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 catctcatctcttagaagttcaacttcaactcttcgcgtgtggcaatcagatactgaggc 607 Query: 644 cttgatttctgaaaaattttcgtcgtttatggtgatatgaaaatacattgtcg-aacgga 702 ||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 608 cttgattcctgaaaaattttcgtcgtttatggtgatatgaaaataca-tgtcgaaacgga 666 Query: 703 gcatgtgtcacgtgctttagcttcaacgattcatttggctctgtgattgttaagccatcg 762 |||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 667 gcatgtgtcacgtgctttagctccaacgattcatttggctctgtgattgtttaagcatcg 726 Query: 763 gttctgtaagagac-tattacagggtttaacatgggtgagatacgtatggggggtggtaa 821 |||||||||||||| ||||||||||| ||||||||||||||||||||| || |||| ||| Sbjct: 727 gttctgtaagagacatattacagggtataacatgggtgagatacgtat-ggtggtgttaa 785 Query: 822 aagtttgaattccttcaatacaatta 847 | |||||||| ||||||||||||||| Sbjct: 786 atgtttgaataccttcaatacaatta 811 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7148 Number of Sequences: 1807 Number of extensions: 7148 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)