BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC29ZH11FM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1516 1041 0.0 >3x_Contig1516 Length = 8750 Score = 1041 bits (525), Expect = 0.0 Identities = 605/627 (96%), Gaps = 5/627 (0%) Strand = Plus / Plus Query: 86 agatccgaacaaacgcaaggaattgggggagatagacattgaatggtgttccgtttagtt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1434 agatccgaacaaacgcaaggaattgggggagatagacattgaatggtgttccgtttagtt 1493 Query: 146 tcataatgtataccataggatgtaagtgagaacggcggttgattcggtcacgcaaacgcc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1494 tcataatgtataccataggatgtaagtgagaacggcggttgattcggtcacgcaaacgcc 1553 Query: 206 aataagactgttattcatacgcaggattttgtcagcaagattcttttctgccgtttcttt 265 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1554 aataagactgttaaacatacgcaggattttgtcagcaagattcttttctgccgtttcttt 1613 Query: 266 ttaccgaaaatattcttgtgtcaggtcattcaaagatgacagaaaaacgtgatcaatgaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614 ttaccgaaaatattcttgtgtcaggtcattcaaagatgacagaaaaacgtgatcaatgaa 1673 Query: 326 gagtgggcagaaaggtgggttgactgcagcgaccagattaggcaacagaaccgctgatca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1674 gagtgggcagaaaggtgggttgactgcagcgaccagattaggcaacagaaccgctgatca 1733 Query: 386 tgagcatgtgaccttaaaatatcatggcttacgaactccaccaaaccacttggctcttcg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1734 tgagcatgtgaccttaaaatatcatggcttacgaactccaccaaaccacttggctcttcg 1793 Query: 446 attgntagttttattttattttntttttttttttacaacaagagatttgtgaaatcatca 505 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1794 attgttagttttattttatttt-tttttttttttacaacaagagatttgtgaaatcatca 1852 Query: 506 tctcgagatgagatacgagatgaggtgaaatcaaatggtttgtgattgtaatcatggggt 565 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1853 tctcgagatgagatacgagatgaggtgaaatcaaatggtttgtgattgtaatcatggcgt 1912 Query: 566 cttttctataagccctaattggaacataatgatggctgttaccgtattaggaaataccgg 625 |||||||||||||| |||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 1913 cttttctataagccataattgaaacataatgatggctgttacagtatcaggaaataccgg 1972 Query: 626 acagtcaaccgcttgaaagactggaatgggaagttttttttttgtgaaaaagaaacaaca 685 |||||||||||| |||||||||| |||| || |||||| | ||||||||||| | ||| Sbjct: 1973 acagtcaaccgc-tgaaagactgcaatgtga--gttttttctcgtgaaaaagaagcgaca 2029 Query: 686 gtggcggattgacaagacaagctggtt 712 || ||||| ||||||||| |||||||| Sbjct: 2030 gt-gcggaatgacaagacgagctggtt 2055 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,208 Number of Sequences: 1807 Number of extensions: 13208 Number of successful extensions: 982 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)