BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZA01RM1.SCF screened BAC_end (1024 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1699 1467 0.0 >3x_Contig1699 Length = 18038 Score = 1467 bits (740), Expect = 0.0 Identities = 869/900 (96%), Gaps = 9/900 (1%) Strand = Plus / Plus Query: 40 aagcctgacgttttggaaaacaaagacattgtactagaagcacctttcacagaagttata 99 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4625 aagcttgacgttttggaaaacaaagacattgtactagaagcacctttcacagaagttata 4684 Query: 100 caaccacaaaagaccgaagaagaacttagaatccaagctgaaaaaagaagggagactggt 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 caaccacaaaagaccgaagaagaacttagaatccaagctgaaaaaagaagggagactggt 4744 Query: 160 aagaggttacaagaacaagccaaacaaagaaggttagaaaaacttcgtcaaaaagaggaa 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4745 aagaggttacaagaacaagccaaacaaagaaggttagaaaaacttcgtcaaaaagaggaa 4804 Query: 220 gagtttgtgtattatgttaatatcagagaagaattgcgcgaccaaccgaagagacaaatt 279 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4805 gagtatgagtattatgttaatatcagagaagaattgcgcgaccaaccgaagagacaaatt 4864 Query: 280 ttaataactctacagaacgcaggatttgacgatgaacaagactttatcaactacatctca 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4865 ttaataactctacagaacgcaggatttgacgatgaacaagactttatcaactacatctca 4924 Query: 340 aaccttgaaaaggttttgaaaagaggccgtatattagacgtggaagacgacgatcaagaa 399 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4925 aaccttgaaaaggttttgaaaagaggccgtatatcagacgtggaagacgacgatcaagaa 4984 Query: 400 gaatctcaggagtccaaatttgatttagtggatgtcccagatgaagagctaaacgatgaa 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4985 gaatctcaggagtccaaatttgatttagtggatgtcccagatgaagagctaaacgatgaa 5044 Query: 460 caaaaaaaggagaaacgtaagcaaaggctattaaaggctaacattgaagcaagattaaag 519 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 5045 caaaaaaaggagaaacgtaagccaaggctattaacggctaacattgaagcaagattaaag 5104 Query: 520 gcaaaagaggaaaaagcacaattgcaaaaggcattggaagaagcgaagaaaaaggatgaa 579 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5105 gcaaaagaggaaaaagcacaattgcaaaaggcattggaagaagcgaagaaaaaggatgac 5164 Query: 580 gattggcggaaacaagatttgaaagggtggacaagggac-aaaagattcaaactcgcgaa 638 |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 5165 gattggcggaaacaagatttgacagggtggacaagggacaaaaagattcaaactcgcgaa 5224 Query: 639 attgatcaaaagtagaaaggacaagttgaagttgaaggaggaaatgaagggaccgt-aat 697 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 5225 attgatcaacagtagaaaggacaagttgaagttgaaggaggaaatgaa-ggaccgtaaat 5283 Query: 698 cac-aagctactcaaagaagaatgaagaatcttgcatctttggcagaagacagtgttggt 756 ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5284 cacaaagctactcaaagaagaatgaagaatcttgcatctttggcagaggacagtgttggt 5343 Query: 757 cccggttaaagatctagacagggcactatagattacgatccctctgacacttttcgtgcg 816 |||||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||| Sbjct: 5344 cccggtaaaagatctagacaggccactatagataacgatccctctgacactttcggtgcg 5403 Query: 817 aatgacgatgactggactatctat-atgatatagc-atcacaccaga-gctttagacgaa 873 |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| Sbjct: 5404 aatgacgatgactggactatctataatgatatagcaatcacaccagaggctttagacgaa 5463 Query: 874 ttcttcgaagatgatacccggaagattgt-gaactagagaaatc-ttgttagaatttgat 931 | | |||||||||| |||| ||||||| |||||||||||||| |||||||| |||||| Sbjct: 5464 tccatcgaagatgaataccgggagattgtggaactagagaaatctttgttagagtttgat 5523 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9314 Number of Sequences: 1807 Number of extensions: 9314 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 1024 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1008 effective length of database: 10,329,639 effective search space: 10412276112 effective search space used: 10412276112 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)