BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZA05FM1.SCF screened BAC_end (1017 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1572 1566 0.0 >3x_Contig1572 Length = 12810 Score = 1566 bits (790), Expect = 0.0 Identities = 882/906 (97%), Gaps = 5/906 (0%) Strand = Plus / Plus Query: 84 atggtaagatacctatcgatgtgaacgaaatgaaaatagatctgatgtccatttcctcac 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5000 atggtaagatacctatcgatgtgaacgaaatgaaaatagatctgatgtccatttcctcac 5059 Query: 144 acaaaatttatggtccaaagggaattggtgccatttacgttagaagaaagccaagagtca 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5060 acaaaatttatggtccaaagggaattggtgccatttacgttagaagaaagccaagagtca 5119 Query: 204 gattagatccgcttattttttttggtggtcaagaaagaggtttacgttctggtacattgg 263 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 5120 gattagatccgcttatctccggtggtggtcaagaaagaggtttacgttctggtacattgg 5179 Query: 264 ctccacctttggttgccggcttcggggaagcagcaagattgatgatgaaagaatacgaga 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5180 ctccacctttggttgccggcttcggggaagcagcaagattgatgatgaaagaatacgaga 5239 Query: 324 acgactcaaatcacattaaaagattatctgacaaattaatgaacgctttgttatctattg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5240 acgactcaaatcacattaaaagattatctgacaaattaatgaacgctttgttatctattg 5299 Query: 384 accatacaatcttaaacggttctgctgaccatcgttacccaggttgtgttaacatttcat 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5300 accatacaatcttaaacggttctgctgaccatcgttacccaggttgtgttaacatttcat 5359 Query: 444 tcgcatatgtcgaaggtgaatccttattgatggctcttagagatattgctttgagttctg 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5360 tcgcatatgtcgaaggtgaatccttattgatggctcttagagatattgctttgagttctg 5419 Query: 504 gttctgcttgtacttcggcatctttagaaccatcttatgtgttgcatgcattgggtaaag 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5420 gttctgcttgtacttcggcatctttagaaccatcttatgtgttgcatgcattgggtaaag 5479 Query: 564 atgatgctttagcacactcttccatcagattcggtattggtagattcaccactgatgaag 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5480 atgatgctttagcacactcttccatcagattcggtattggtagattcaccactgatgaag 5539 Query: 624 aaattgattacgttatcaaggctatcacggaaagagttgatttcctaagagagttgtccc 683 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5540 aaattgattacgttatcaaggctatcacggaaagagttgatttcctaagagagttgtccc 5599 Query: 684 cattatgggagatggtcaaggaaggtattgacttgaactccatcgaatggtcaggtcatt 743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5600 cattatgggagatggtcaaggaaggtattgacttgaactccatcgaatggtcaggtcatt 5659 Query: 744 aagctggaacaaaagtgatctatatcatagattcatcattttattttcttgctagagtgc 803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5660 aagctggaacaaaagtgatctatatcatagattcatcattttattttcttgctagagtgc 5719 Query: 804 ataccaaattcttatctgggttctcaa-ttacatgatctccccgtat-acttggggaact 861 ||||||||| |||||||| ||||||| |||||||||||||| ||| ||| |||||||| Sbjct: 5720 ataccaaatctttatctggtttctcaatttacatgatctcccgttataactcggggaact 5779 Query: 862 actaccgtatatactttggttctcgatttcaaagtacaatcataatctcatctgacttat 921 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5780 actaccgtatatactttgttcctcgatttcaaagtacaatcataatctcatctgacttat 5839 Query: 922 cgttttttctttaatctccctctt-atct-aatattatgactacatggttttgt-agctt 978 |||||||||||| |||| ||||| |||| |||||||||| || || ||||||| ||||| Sbjct: 5840 cgttttttcttttatctttctcttcatctcaatattatgattagattgttttgtaagctt 5899 Query: 979 ttctac 984 |||||| Sbjct: 5900 ttctac 5905 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7823 Number of Sequences: 1807 Number of extensions: 7823 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 1017 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1001 effective length of database: 10,329,639 effective search space: 10339968639 effective search space used: 10339968639 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)