BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC2ZA05FM1.SCF screened BAC_end
         (1017 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1572                                                        1566   0.0  

>3x_Contig1572 
          Length = 12810

 Score = 1566 bits (790), Expect = 0.0
 Identities = 882/906 (97%), Gaps = 5/906 (0%)
 Strand = Plus / Plus

                                                                        
Query: 84   atggtaagatacctatcgatgtgaacgaaatgaaaatagatctgatgtccatttcctcac 143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5000 atggtaagatacctatcgatgtgaacgaaatgaaaatagatctgatgtccatttcctcac 5059

                                                                        
Query: 144  acaaaatttatggtccaaagggaattggtgccatttacgttagaagaaagccaagagtca 203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5060 acaaaatttatggtccaaagggaattggtgccatttacgttagaagaaagccaagagtca 5119

                                                                        
Query: 204  gattagatccgcttattttttttggtggtcaagaaagaggtttacgttctggtacattgg 263
            |||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||
Sbjct: 5120 gattagatccgcttatctccggtggtggtcaagaaagaggtttacgttctggtacattgg 5179

                                                                        
Query: 264  ctccacctttggttgccggcttcggggaagcagcaagattgatgatgaaagaatacgaga 323
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5180 ctccacctttggttgccggcttcggggaagcagcaagattgatgatgaaagaatacgaga 5239

                                                                        
Query: 324  acgactcaaatcacattaaaagattatctgacaaattaatgaacgctttgttatctattg 383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5240 acgactcaaatcacattaaaagattatctgacaaattaatgaacgctttgttatctattg 5299

                                                                        
Query: 384  accatacaatcttaaacggttctgctgaccatcgttacccaggttgtgttaacatttcat 443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5300 accatacaatcttaaacggttctgctgaccatcgttacccaggttgtgttaacatttcat 5359

                                                                        
Query: 444  tcgcatatgtcgaaggtgaatccttattgatggctcttagagatattgctttgagttctg 503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5360 tcgcatatgtcgaaggtgaatccttattgatggctcttagagatattgctttgagttctg 5419

                                                                        
Query: 504  gttctgcttgtacttcggcatctttagaaccatcttatgtgttgcatgcattgggtaaag 563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5420 gttctgcttgtacttcggcatctttagaaccatcttatgtgttgcatgcattgggtaaag 5479

                                                                        
Query: 564  atgatgctttagcacactcttccatcagattcggtattggtagattcaccactgatgaag 623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5480 atgatgctttagcacactcttccatcagattcggtattggtagattcaccactgatgaag 5539

                                                                        
Query: 624  aaattgattacgttatcaaggctatcacggaaagagttgatttcctaagagagttgtccc 683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5540 aaattgattacgttatcaaggctatcacggaaagagttgatttcctaagagagttgtccc 5599

                                                                        
Query: 684  cattatgggagatggtcaaggaaggtattgacttgaactccatcgaatggtcaggtcatt 743
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5600 cattatgggagatggtcaaggaaggtattgacttgaactccatcgaatggtcaggtcatt 5659

                                                                        
Query: 744  aagctggaacaaaagtgatctatatcatagattcatcattttattttcttgctagagtgc 803
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5660 aagctggaacaaaagtgatctatatcatagattcatcattttattttcttgctagagtgc 5719

                                                                        
Query: 804  ataccaaattcttatctgggttctcaa-ttacatgatctccccgtat-acttggggaact 861
            |||||||||  |||||||| ||||||| ||||||||||||||  ||| ||| ||||||||
Sbjct: 5720 ataccaaatctttatctggtttctcaatttacatgatctcccgttataactcggggaact 5779

                                                                        
Query: 862  actaccgtatatactttggttctcgatttcaaagtacaatcataatctcatctgacttat 921
            |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 5780 actaccgtatatactttgttcctcgatttcaaagtacaatcataatctcatctgacttat 5839

                                                                        
Query: 922  cgttttttctttaatctccctctt-atct-aatattatgactacatggttttgt-agctt 978
            |||||||||||| ||||  ||||| |||| |||||||||| || || ||||||| |||||
Sbjct: 5840 cgttttttcttttatctttctcttcatctcaatattatgattagattgttttgtaagctt 5899

                  
Query: 979  ttctac 984
            ||||||
Sbjct: 5900 ttctac 5905


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7823
Number of Sequences: 1807
Number of extensions: 7823
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1017
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1001
effective length of database: 10,329,639
effective search space: 10339968639
effective search space used: 10339968639
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)