BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC2ZA05RM1.SCF screened BAC_end
         (1019 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig975                                                         1750   0.0  

>3x_Contig975 
          Length = 5628

 Score = 1750 bits (883), Expect = 0.0
 Identities = 934/945 (98%), Gaps = 5/945 (0%)
 Strand = Plus / Plus

                                                                        
Query: 45   ctttgattgattaagtaataagaactttctgagcatttcgatcaatagctacggtatgga 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3974 ctttgattgattaagtaataagaactttctgagcatttcgatcaatagctacggtatgga 4033

                                                                        
Query: 105  agaagtacgagattaatagtactgaccttcttagtcatgtagtttgacatattctctttt 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4034 agaagtacgagattaatagtactgaccttcttagtcatgtagtttgacatattctctttt 4093

                                                                        
Query: 165  tttgtacctgcgttacatttagaaagcacaacgaaggagtgtttctattgtagcagttat 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4094 tttgtacctgcgttacatttagaaagcacaacgaaggagtgtttctattgtagcagttat 4153

                                                                        
Query: 225  tgttgtccaacgcttggttactttaattacggcatagaatattattattttagttgttac 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4154 tgttgtccaacgcttggttactttaattacggcatagaatattattattttagttgttac 4213

                                                                        
Query: 285  gcaaaagtgaagttgaagaattcagaaacggaaaattaagttcaaggacatttaaagcaa 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4214 gcaaaagtgaagttgaagaattcagaaacggaaaattaagttcaaggacatttaaagcaa 4273

                                                                        
Query: 345  tacgatagatccaagggtttaattgctttgaaccttaaatgtgcaaaggtgaagggagag 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4274 tacgatagatccaagggtttaattgctttgaaccttaaatgtgcaaaggtgaagggagag 4333

                                                                        
Query: 405  ggacacataacccaaccacatatatattgaccgtcgtgctttgacctaccgactattgaa 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4334 ggacacataacccaaccacatatatattgaccgtcgtgctttgacctaccgactattgaa 4393

                                                                        
Query: 465  cttttactattccgttctatacgttacagcactttaaagggttttcttttgggtttttgc 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4394 cttttactattccgttctatacgttacagcactttaaagggttttcttttgggtttttgc 4453

                                                                        
Query: 525  aggagatattttttcggtctgtttttaattatttctttgccatcgactgaccagtagaac 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4454 aggagatattttttcggtctgtttttaattatttctttgccatcgactgaccagtagaac 4513

                                                                        
Query: 585  ggaaacacaatcaagtttgcatcattatcgtgaacgattccataaccaaattgtggcaat 644
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4514 ggaaacacaatcaagtttgcatcattatcgtgaacgattccataaccaaattgtggcaat 4573

                                                                        
Query: 645  -aacaagcgtctgacttctatttgctgttttcttctttgaggttagctacactaacttct 703
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4574 aaacaagcgtctgacttctatttgctgttttcttctttgaggttagctacactaacttct 4633

                                                                        
Query: 704  cacactagtaaacaggtggatttacaattttcgatcttaaccgacaaacaaagcaactgt 763
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4634 cacactagtaaacaggtggatttacaattttcgatcttaaccgacaaacaaagcaactgt 4693

                                                                        
Query: 764  gtcagcaaacagtcatattagagatatattacccaatacatcatgagttcatccgttggt 823
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4694 gtcagcaaacagtcatattagagatatatcacccaatacatcatgagttcatccgttggt 4753

                                                                        
Query: 824  tctactactattactagtagattcttggcattaaccaagaccactaaatttgcatggttc 883
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4754 tctactactattactagtagattcttggcattaaccaagaccactaaatttgcatggttc 4813

                                                                        
Query: 884  atcggacattttgccgttgtactatgctctatattttattgcctntctttca-gtctaca 942
            ||||||||||||||||||||||||||||||||||||||||| || ||| ||| |||||||
Sbjct: 4814 atcggacattttgccgttgtactatgctctatattttattggctttctctcaggtctaca 4873

                                                         
Query: 943  tc-ttgactgaaatat-gtacag-atcatttttcttgnagctatg 984
            || ||||||||||||| |||||| ||||| ||||||| |||||||
Sbjct: 4874 tctttgactgaaatatggtacagaatcatctttcttggagctatg 4918


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7578
Number of Sequences: 1807
Number of extensions: 7578
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 1019
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1003
effective length of database: 10,329,639
effective search space: 10360627917
effective search space used: 10360627917
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)