BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZB10RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1142 906 0.0 >3x_Contig1142 Length = 5741 Score = 906 bits (457), Expect = 0.0 Identities = 528/545 (96%), Gaps = 5/545 (0%) Strand = Plus / Minus Query: 48 atgtttataagccggatcctttaatacctcatctataccttgtaagtatcctgtagagca 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 atgtttataagccggatcctttaatacctcatctataccttgtaagtatcctgtagagca 1008 Query: 108 atgtgcgaccaaaaacttgccagtatttgcaaggatttttttattctgatcttcttgtgc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 atgtgcgaccaaaaacttgccagtatttgcaaggatttttttattctgatcttcttgtgc 948 Query: 168 atattgcattaccttgtcatataaagtctttgcgtaaaaccctggtgaacaaattatgat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 atattgcattaccttgtcatataaagtctttgcgtaaaaccctggtgaacaaattatgat 888 Query: 228 gcatttcagtgtgtcaaaatcgaaatgtctaaccatggacgcataagtggctctgtaaaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 887 gcatttcagtgtgtcaaaatcgaaatgtctaaccatggacgcataagtggctctgtaaaa 828 Query: 288 tttctctaccttgtcatcaaacttcattatatctgtacctctcttcttctttggaatgct 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 tttctctaccttgtcatcaaacttcattatatctgtacctctcttcttctttggaatgct 768 Query: 348 atattcgatcttatgctttaataccgtagagaatgaattgatcaagcaaatgtgggaaat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 atattcgatcttatgctttaataccgtagagaatgaattgatcaagcaaatgtgggaaat 708 Query: 408 accttcttgtaagacaacagctgccatatcagaacgaccctcaatattacaagcttgttt 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 accttcttgtaagacaacagctgccatatcagaacgaccctcaatattacaagcttgttt 648 Query: 468 tacgagattattcaacgtatgaattgaaat-atcttttgatc-atgtgaattgggtaaaa 525 |||||||||| || |||||||||||| ||| ||| ||||||| ||||||| ||||||| | Sbjct: 647 tacgagatta-tccacgtatgaattgtaatcatc-tttgatcaatgtgaa-tgggtaaga 591 Query: 526 gaaatcccaggggaaacttaagaatttacccactggcaaaacctggtttgcatttaaata 585 |||||| || |||||| ||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 590 gaaatcgatggtgaaactgaagaatttacccactggcaaatcctggttagcattcgaata 531 Query: 586 atcat 590 ||||| Sbjct: 530 atcat 526 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 17,733 Number of Sequences: 1807 Number of extensions: 17733 Number of successful extensions: 179 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)