BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZB12FM1.SCF screened BAC_end (987 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1426 1336 0.0 >3x_Contig1426 Length = 8319 Score = 1336 bits (674), Expect = 0.0 Identities = 713/724 (98%), Gaps = 2/724 (0%) Strand = Plus / Plus Query: 86 tgaatcaattattcaaaccaactgttaaagatcaaattataaactacgaaaaagcagtga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tgaatcaattattcaaaccaactgttaaagatcaaattataaactacgaaaaagcagtga 642 Query: 146 cattttataatttgataggctcattgcctaccaaaagacccatttatctcattttacgtg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 cattttataatttgataggctcattgcctaccaaaagacccatttatctcattttacgtg 702 Query: 206 tctttaatgaggttttgaaaatgcttaagatcctaatggataaatgggagcactatttat 265 ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 703 tctttaatgaggttttgaaaaggccaaagatcctaatggataaatgggagcactatttat 762 Query: 266 tcatttttttcatcttggaggtaccttctttaaggcaatgtattaacaacagtactacaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 tcatttttttcatcttggaggtaccttctttaaggcaatgtattaacaacagtactacaa 822 Query: 326 tttctagaacacccaagattaagactttaagttacgaaatattaaaaagatgtattggtt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 tttctagaacacccaagattaagactttaagttacgaaatattaaaaagatgtattggtt 882 Query: 386 acttggggtcaatgaatagtaaagtttcggtgaaatataagaatcacttagttcgtttac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 acttggggtcaatgaatagtaaagtttcggtgaaatataagaatcacttagttcgtttac 942 Query: 446 atccattgaaatttcaaaagcaatgggaaattttaaacttgtatttgagttatcagttcc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 atccattgaaatttcaaaagcaatgggaaattttaaacttgtatttgagttatcagttcc 1002 Query: 506 agaaaataggacccggtccgccgcattcaccacgaggattatcaggaacgttgttaactg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 agaaaataggacccggtccgccgcattcaccacgaggattatcaggaacgttgttaactg 1062 Query: 566 aatcatcgcctgtggatgaaaccaaagatggaactgtatcttatctnttccaccccggaa 625 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1063 aatcatcgcctgtggatgaaaccaaagatggaactgtatcttatcttttccaccccggaa 1122 Query: 626 ggcaaaagataccgttagagagcaggttcagaattgaanaatacggacttgactggcata 685 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1123 ggcaaaagataccgttagagagcaggttcagaattgaaaaatacggacttgactggcata 1182 Query: 686 ttcgcacggtgtgtcagctaatgaacatatactttcaagctcattgtgaacagccaaaat 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1183 ttcgcacggtgtgtcagctaatgaacatatactttcaagctcattgtgaacagccaaaat 1242 Query: 746 gtgacattctgggtttttttacatatgataattgatttcattgattac-aacgtgatttt 804 |||||| ||| |||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 1243 gtgaca-tctcggttttttacaatatgataattgatttcattgattacaaacgtgatttt 1301 Query: 805 atga 808 |||| Sbjct: 1302 atga 1305 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6824 Number of Sequences: 1807 Number of extensions: 6824 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 987 length of database: 10,358,551 effective HSP length: 16 effective length of query: 971 effective length of database: 10,329,639 effective search space: 10030079469 effective search space used: 10030079469 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)