BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZC01FM1.SCF screened BAC_end (1111 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1575 763 0.0 >3x_Contig1575 Length = 11952 Score = 763 bits (385), Expect = 0.0 Identities = 468/491 (95%), Gaps = 4/491 (0%) Strand = Plus / Minus Query: 92 tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5962 tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 5903 Query: 152 gttctcagtcccacgcatttcatagtacgcgtttttataggtaaaatccaaaaaaaaaaa 211 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5902 gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 5843 Query: 212 aagttgaagatttcagattan-atcantgaggccaaaatccaacaaaaattatactctat 270 ||||||||||||||||| || | || |||||||||||||||||||||||||||||||| Sbjct: 5842 aagttgaagatttcagaatattagcatagaggccaaaatccaacaaaaattatactctat 5783 Query: 271 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5782 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 5723 Query: 331 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5722 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 5663 Query: 391 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5662 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 5603 Query: 451 tccatgtaatatagagaaacagcaggaaataatgccatctaagctatattgtaaaccctc 510 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 5602 tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaa-cctc 5544 Query: 511 gtaaataaggttgatagaaaccatccattcgattgggaaggaggccaaagtttgaggggt 570 ||| ||||| ||||||||||| ||| || |||||| ||||||| ||||||| || |||| Sbjct: 5543 gtagataagtttgatagaaacgatcaatcagattggaaaggagg-caaagttaga-gggt 5486 Query: 571 tttttagggaa 581 || |||||||| Sbjct: 5485 ttcttagggaa 5475 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 36,565 Number of Sequences: 1807 Number of extensions: 36565 Number of successful extensions: 782 Number of sequences better than 1.0e-20: 1 length of query: 1111 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1095 effective length of database: 10,329,639 effective search space: 11310954705 effective search space used: 11310954705 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)