BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZC01RM1.SCF screened BAC_end (1023 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1448 1292 0.0 >3x_Contig1448 Length = 10333 Score = 1292 bits (652), Expect = 0.0 Identities = 829/863 (96%), Gaps = 19/863 (2%) Strand = Plus / Minus Query: 44 acaagctttatcaattgtatgaacagggtatagtgctttcccgtaagcaaaatcaaaaaa 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6109 acaagctttatcaattgtatgaacagggtatagtgctttcccgtaagcaaaatcaaaaaa 6050 Query: 104 tagagcagaacaaaagagaatcaacaaccatagttgacctttactcattctataacaaac 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6049 tagagcagaacaaaagagaatcaacaaccatagttgacctttactcattctataacaaac 5990 Query: 164 cacacaactgctgtagcttctaataaaatgagactatcaagacaaatagcagttgttctg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5989 cacacaactgctgtagcttctaataaaatgagactatcaagacaaatagcagttgttctg 5930 Query: 224 ctgaatagcctaaatcgcgccctttgtcgaacaaatataataattagtaatattcttcaa 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5929 ctgaatagcctaaatcgcgccctttgtcgaacaaatataataattagtaatattcttcaa 5870 Query: 284 ctttagctttgaatacaaaatggagaagattgatgtaatattaggggaaataagtcatat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5869 ctttagctttgaatacaaaatggagaagattgatgtaatattaggggaaataagtcatat 5810 Query: 344 agctcgtagtactctcgagccgaaacggttcaagttgatgctttatttatgtgacactga 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5809 agctcgtagtactctcgagccgaaacggttcaagttgatgctttatttatgtgacactga 5750 Query: 404 cactgacatcaatatcataataacattacccggtcctatgccatgtccatcaacggcttt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5749 cactgacatcaatatcataataacattacccggtcctatgccatgtccatcaacggcttt 5690 Query: 464 gaaaaaaaaatgtttgaaaggggaatttgaataataaagatccattcatgattttaacac 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5689 gaaaaaaaaatgtttgaaaggggaatttgaataataaagatccattcatgattttaacac 5630 Query: 524 gttagttgaagaaaacatcgaaggtagagacccaacagagcggaaggaaattagcaatga 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5629 gttagttgaagaaaacatcgaaggtagagacccaacagagcggaaggaaattagcaatga 5570 Query: 584 aacttgacatcaatgtatgtgacacattgtgtactagagtaatttgtgaggtgcttttat 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5569 aacttgacatcaatgtatgtgacacattgtgtactagagtaatttgtgaggtgcttttat 5510 Query: 644 cac-gag-atcgctg-tggacgtt-gcaa-tgcatatt-agtatctta-gcgtttttct- 695 ||| ||| ||||||| || ||||| |||| |||||||| ||||||||| |||||||||| Sbjct: 5509 cacggagaatcgctgttgaacgttagcaattgcatattaagtatcttaggcgtttttctg 5450 Query: 696 gtattaataca-ttatgttttatgttttgaatcaacagattatattt-tttagcccttat 753 |||| |||||| |||||||||||||||||| |||||||||||||||| || ||||||||| Sbjct: 5449 gtatcaatacatttatgttttatgttttgattcaacagattatatttcttcagcccttat 5390 Query: 754 -agccactaaaagaaagagc-tttact-acatttttttcatttatggggacctttatttg 810 ||| ||||||||||||||| |||||| ||||||||||||| ||||| || ||||||||| Sbjct: 5389 cagcaactaaaagaaagagcttttactaacatttttttcatctatggtga-ctttatttg 5331 Query: 811 tcttta-gaaaaa-ctcactgcccaaacttga-aggtttaaggccattgactttcattcc 867 |||||| |||||| |||| |||| ||| ||| ||| |||||| |||||||||||| ||| Sbjct: 5330 tctttacgaaaaagctcagtgccagaacctgacagggttaagggcattgactttca-tcc 5272 Query: 868 tga-gaaccctgnggttttaatt 889 ||| ||||| || |||||||||| Sbjct: 5271 tgaggaaccttggggttttaatt 5249 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,193 Number of Sequences: 1807 Number of extensions: 16193 Number of successful extensions: 79 Number of sequences better than 1.0e-20: 1 length of query: 1023 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1007 effective length of database: 10,329,639 effective search space: 10401946473 effective search space used: 10401946473 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)