BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZC03RM1.SCF screened BAC_end (997 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1006 1376 0.0 >3x_Contig1006 Length = 5179 Score = 1376 bits (694), Expect = 0.0 Identities = 754/765 (98%), Gaps = 7/765 (0%) Strand = Plus / Plus Query: 50 ctttaaatttgaaggaaactgacaatgttgacatagtactcaatgataggaaggaaaaaa 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 ctttaaatttgaaggaaactgacaatgttgacatagtactcaatgataggaaggaaaaaa 563 Query: 110 ttgatgaactacaacggagaattgccacagacaagcgcgtgctaatcaacaggttagaag 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ttgatgaactacaacggagaattgccacagacaagcgcgtgctaatcaacaggttagaag 623 Query: 170 aaggacaagtaaaactgatacgaaagtttgttgatgaagaaacaaaaaatgtcgaaggta 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 aaggacaagtaaaactgatacgaaagtttgttgatgaagaaacaaaaaatgtcgaaggta 683 Query: 230 atactactgacggtgaggagtctgaagatatagaagcacttttgaaggaattagttctta 289 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 agactactgacggtgaggagtctgaagatatagaagcacttttgaaggaattagttctta 743 Query: 290 ttcaattaaaacgaaaacgaaaacttaatcaaattattgacgtgataacagacaactcta 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ttcaattaaaacgaaaacgaaaacttaatcaaattattgacgtgataacagacaactcta 803 Query: 350 aagtttacaaatataggaaaatgatatctcaaggaactgacattgacgtttctgatgttg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 aagtttacaaatataggaaaatgatatctcaaggaactgacattgacgtttctgatgttg 863 Query: 410 acgaatgtttagatgtgatatatcaaacattaagcaaggaaggttagttgtataattcgt 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 864 acgaatgtttagatgtgatatatcaaacattaagcaaggaaggttagttgtataattcgt 923 Query: 470 attcgatcgtcatgtacacaatgactactttcttcatgatgtagcattgtattaattaaa 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 attcgatcgtcatgtacacaatgactactttcttcatgatgtagcattgtattaattaaa 983 Query: 530 cataagagtactcaacaaaccatgttgaatcatctctacaactcttacccgattatattc 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 cataagagtactcaacaaaccatgttgaatcatctctacaactcttacccgattatattc 1043 Query: 590 attataaatg-gattgtacatatcagtttgttaacttacatatgggctaccataaatata 648 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1044 attataaatgcgattgtacatatcagtttgttaacttacatatgggctaccataaatata 1103 Query: 649 ataatattagagttttagttatctgaaagtctgtaaggtgtaacgctgaagatatcatcc 708 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1104 ataatattagagttttagttatctgaaagtctgtaaggtgtaacgctgaagatatcatcc 1163 Query: 709 gtagttttctg-acacattatncagttatgt-aaaacaaagtaagaacgcgatcttgc-a 765 ||||||||||| ||||||||| |||| |||| ||||||||| |||||||||||||||| | Sbjct: 1164 gtagttttctgaacacattatccagtaatgtaaaaacaaagaaagaacgcgatcttgcaa 1223 Query: 766 tgttgaaataaa-gtgac-tttattgtctttctg-ggaacttaat 807 |||||||||||| ||||| ||||||||||||||| |||||||||| Sbjct: 1224 tgttgaaataaatgtgacttttattgtctttctgtggaacttaat 1268 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8934 Number of Sequences: 1807 Number of extensions: 8934 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 997 length of database: 10,358,551 effective HSP length: 16 effective length of query: 981 effective length of database: 10,329,639 effective search space: 10133375859 effective search space used: 10133375859 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)