BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZC11FM1.SCF screened BAC_end (999 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1697 1324 0.0 >3x_Contig1697 Length = 16220 Score = 1324 bits (668), Expect = 0.0 Identities = 683/688 (99%) Strand = Plus / Minus Query: 88 caaaactacacgatattaacgataagcagatcactggacccagatactggtactctgcac 147 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10465 caaaactaaacgatattaacgataagcagatcactggacccagatactggtactctgcac 10406 Query: 148 agcgcgagatatatctatatctatatatatatatatatatattcacacaagaatagaaca 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10405 agcgcgagatatatctatatctatatatatatatatatatattcacacaagaatagaaca 10346 Query: 208 agataatcacatcacgtgattagagctgtacctcttccagctaaactagcagacaataac 267 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10345 agataatcacatcacgtgacaagagctgtacctcttccagctaaactagcagacaataac 10286 Query: 268 ttctaacaagcgcaggcgcttgatattttctagcactgggttgtaacagatgcagagaat 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10285 ttctaacaagcgcaggcgcttgatattttctagcactgggttgtaacagatgcagagaat 10226 Query: 328 gcgaatacaaatacaactactatccaaacactcttacacaagcaaacactgccctgtact 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10225 gcgaatacaaatacaactactatccaaacactcttacacaagcaaacactgccctgtact 10166 Query: 388 tagcagtcttttggtctgcttgctccaactcagtccttgcctagcagaatttcgggaatt 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10165 tagcagtcttttggtctgcttgctccaactcagtccttgcctagcagaatttcgggaatt 10106 Query: 448 tgtcttcggcacaaacatgaagtaaaaaaaaaaaggcgaacccagcaaaaaccagtattc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10105 tgtcttcggcacaaacatgaagtaaaaaaaaaaaggcgaacccagcaaaaaccagtattc 10046 Query: 508 atgcgacgagatgttattcctgcatgtttggaacgtttcaaaagtgcaatgtttctccga 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10045 atgcgacgagatgttattcctgcatgtttggaacgtttcaaaagtgcaatgtttctccga 9986 Query: 568 cgtttgtcaggagacttgcattgacaagtgttattcttgttttgtttggttgagggcttt 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9985 cgtttgtcaggagacttgcattgacaagtgttattcttgttttgtttggttgagggcttt 9926 Query: 628 cctgttacactatgtcgatctgtttatccatgtttcaagttccgccagttgtgtaagttt 687 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9925 cctgttacactatgtcgatctgtttatccatgtttcaagttccgccagttgtgtaagttc 9866 Query: 688 cggtgcgcaaacatgatacgaagagcgaatggtaaactaagttaaacttgcatgagagtt 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9865 cggtgcgcaaacatgatacgaagagcgaatggtaaactaagttaaacttgcatgagagtt 9806 Query: 748 tacgcagtgattttgggctgctactgct 775 ||||||||||||||| |||||||||||| Sbjct: 9805 tacgcagtgattttgtgctgctactgct 9778 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,699 Number of Sequences: 1807 Number of extensions: 16699 Number of successful extensions: 2526 Number of sequences better than 1.0e-20: 1 length of query: 999 length of database: 10,358,551 effective HSP length: 16 effective length of query: 983 effective length of database: 10,329,639 effective search space: 10154035137 effective search space used: 10154035137 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)