BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZD05RM1.SCF screened BAC_end (1028 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1540 1729 0.0 >3x_Contig1540 Length = 9505 Score = 1729 bits (872), Expect = 0.0 Identities = 962/985 (97%), Gaps = 7/985 (0%) Strand = Plus / Plus Query: 48 taaagtttcgatacatatcttcttcatttctcctgacagcatttcaccgctcttgtattg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5952 taaagtttcgatacatatcttcttcatttctcctgacagcatttcaccgctcttgtattg 6011 Query: 108 gtcatagcattgcttcaaaaactcatcgtcatctttgaagaatgacaggtattggtatgc 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6012 gtcatagcattgcttcaaaaactcatcgtcatctttgaagaatgacaggtattggtatgc 6071 Query: 168 aacatcaacgtctgggttaccaccgtattttctgtgttcttccatggaaactttacctcc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6072 aacatcaacgtctgggttaccaccgtattttctgtgttcttccatggaaactttacctcc 6131 Query: 228 actgaacgcatacttattaatcttcttttgtatttgttttggagtatcagtcatgaaaat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6132 actgaacgcatacttattaatcttcttttgtatttgttttggagtatcagtcatgaaaat 6191 Query: 288 ggcactggtgtcatcacttgcactcatcttagtggaagaaccttgcaatgcagggaaaaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6192 ggcactggtgtcatcacttgcactcatcttagtggaagaaccttgcaatgcagggaaaaa 6251 Query: 348 tctagaatgtagtaaggaaggcttgctatattttaatttgtcggcaacgtctctgcagac 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6252 tctagaatgtagtaaggaaggcttgctatattttaatttgtcggcaacgtctctgcagac 6311 Query: 408 tctgaagtatggatcttgatcgatagcacatggaatcaaacaaggggtcttatcgggtaa 467 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6312 tctgaagtatttatattgatcgatagcacatggaatcaaacaaggggtcttatcgggtaa 6371 Query: 468 acccaacacatcagggaaagaacttgggaaagcagatgcaatttgaatagaagcaaaatg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6372 acccaacacatcagggaaagaacttgggaaagcagatgcaatttgaatagaagcaaaatg 6431 Query: 528 gaatttaccaatacaatctgaatcggtgaaaccaaacacagctttggctgttgatcccgt 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6432 gaatttaccaatacaatctgaatcggtgaaaccaaacacagctttggctgttgatcccgt 6491 Query: 588 gatttgtctcgaaatccgtaccactgtttcatagaaaccgccacccatgtattctaaatc 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6492 gatttgtctcgaaatccgtaccactgtttcatagaaaccgccacccatgtattctaaatc 6551 Query: 648 ggagaaaataaaagtcttctctgggttgaatccaacagcgacgatatcctttgcattgtc 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6552 ggagaaaataaaagtcttctctgggttgaatccaacagcgacgatatcctttgcattgtc 6611 Query: 708 cttggtgaactttntgacatctttaatggtcaactttggcttgaacaagaacttttcatc 767 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6612 cttggtgaactttttgacatctttaatggtcaactttggcttgaacaagaacttttcatc 6671 Query: 768 gtctgttaattcaataactaaaggacaatcgaaaacattctgttaccatttntgtaagat 827 |||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 6672 gtctgttaattcaataactaaaggacaatcgaaaacatcctgtaaccattttgtaaagat 6731 Query: 828 gaatgggatcatatgacccaagtgcattgagtcactagaaggaacacggccagtatacaa 887 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 6732 gaatgggatcatatgacccaagtgcattgagtcactagaaggaccacggccagtatacaa 6791 Query: 888 gaaaaatgggttaccttgttcatacaaatccaaaatctttgtgaa-tcacgttcactaa- 945 ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 6792 gaaaaatggtttaccttgttcatacaaatccaaaatctttgtgaagtcacgttcactaaa 6851 Query: 946 -gaaacacctttgcgcaag-aatgatgaggcttgtgaccgttc-cagcctcaattct-gc 1001 ||||||||||||||||| |||||||||||||||||||| || ||||||||| ||| || Sbjct: 6852 gaaaacacctttgcgcaagaaatgatgaggcttgtgaccggtcacagcctcaaatctggc 6911 Query: 1002 taagggttcttca-caatagcttta 1025 ||||| ||||||| ||||||||||| Sbjct: 6912 taaggtttcttcaccaatagcttta 6936 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7893 Number of Sequences: 1807 Number of extensions: 7893 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 1028 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1012 effective length of database: 10,329,639 effective search space: 10453594668 effective search space used: 10453594668 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)