BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC2ZD05RM1.SCF screened BAC_end
         (1028 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1540                                                        1729   0.0  

>3x_Contig1540 
          Length = 9505

 Score = 1729 bits (872), Expect = 0.0
 Identities = 962/985 (97%), Gaps = 7/985 (0%)
 Strand = Plus / Plus

                                                                        
Query: 48   taaagtttcgatacatatcttcttcatttctcctgacagcatttcaccgctcttgtattg 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5952 taaagtttcgatacatatcttcttcatttctcctgacagcatttcaccgctcttgtattg 6011

                                                                        
Query: 108  gtcatagcattgcttcaaaaactcatcgtcatctttgaagaatgacaggtattggtatgc 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6012 gtcatagcattgcttcaaaaactcatcgtcatctttgaagaatgacaggtattggtatgc 6071

                                                                        
Query: 168  aacatcaacgtctgggttaccaccgtattttctgtgttcttccatggaaactttacctcc 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6072 aacatcaacgtctgggttaccaccgtattttctgtgttcttccatggaaactttacctcc 6131

                                                                        
Query: 228  actgaacgcatacttattaatcttcttttgtatttgttttggagtatcagtcatgaaaat 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6132 actgaacgcatacttattaatcttcttttgtatttgttttggagtatcagtcatgaaaat 6191

                                                                        
Query: 288  ggcactggtgtcatcacttgcactcatcttagtggaagaaccttgcaatgcagggaaaaa 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6192 ggcactggtgtcatcacttgcactcatcttagtggaagaaccttgcaatgcagggaaaaa 6251

                                                                        
Query: 348  tctagaatgtagtaaggaaggcttgctatattttaatttgtcggcaacgtctctgcagac 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6252 tctagaatgtagtaaggaaggcttgctatattttaatttgtcggcaacgtctctgcagac 6311

                                                                        
Query: 408  tctgaagtatggatcttgatcgatagcacatggaatcaaacaaggggtcttatcgggtaa 467
            ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6312 tctgaagtatttatattgatcgatagcacatggaatcaaacaaggggtcttatcgggtaa 6371

                                                                        
Query: 468  acccaacacatcagggaaagaacttgggaaagcagatgcaatttgaatagaagcaaaatg 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6372 acccaacacatcagggaaagaacttgggaaagcagatgcaatttgaatagaagcaaaatg 6431

                                                                        
Query: 528  gaatttaccaatacaatctgaatcggtgaaaccaaacacagctttggctgttgatcccgt 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6432 gaatttaccaatacaatctgaatcggtgaaaccaaacacagctttggctgttgatcccgt 6491

                                                                        
Query: 588  gatttgtctcgaaatccgtaccactgtttcatagaaaccgccacccatgtattctaaatc 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6492 gatttgtctcgaaatccgtaccactgtttcatagaaaccgccacccatgtattctaaatc 6551

                                                                        
Query: 648  ggagaaaataaaagtcttctctgggttgaatccaacagcgacgatatcctttgcattgtc 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6552 ggagaaaataaaagtcttctctgggttgaatccaacagcgacgatatcctttgcattgtc 6611

                                                                        
Query: 708  cttggtgaactttntgacatctttaatggtcaactttggcttgaacaagaacttttcatc 767
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6612 cttggtgaactttttgacatctttaatggtcaactttggcttgaacaagaacttttcatc 6671

                                                                        
Query: 768  gtctgttaattcaataactaaaggacaatcgaaaacattctgttaccatttntgtaagat 827
            |||||||||||||||||||||||||||||||||||||| |||| |||||||    |||||
Sbjct: 6672 gtctgttaattcaataactaaaggacaatcgaaaacatcctgtaaccattttgtaaagat 6731

                                                                        
Query: 828  gaatgggatcatatgacccaagtgcattgagtcactagaaggaacacggccagtatacaa 887
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6732 gaatgggatcatatgacccaagtgcattgagtcactagaaggaccacggccagtatacaa 6791

                                                                        
Query: 888  gaaaaatgggttaccttgttcatacaaatccaaaatctttgtgaa-tcacgttcactaa- 945
            ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 6792 gaaaaatggtttaccttgttcatacaaatccaaaatctttgtgaagtcacgttcactaaa 6851

                                                                        
Query: 946  -gaaacacctttgcgcaag-aatgatgaggcttgtgaccgttc-cagcctcaattct-gc 1001
              ||||||||||||||||| |||||||||||||||||||| || ||||||||| ||| ||
Sbjct: 6852 gaaaacacctttgcgcaagaaatgatgaggcttgtgaccggtcacagcctcaaatctggc 6911

                                     
Query: 1002 taagggttcttca-caatagcttta 1025
            ||||| ||||||| |||||||||||
Sbjct: 6912 taaggtttcttcaccaatagcttta 6936


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7893
Number of Sequences: 1807
Number of extensions: 7893
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 1028
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1012
effective length of database: 10,329,639
effective search space: 10453594668
effective search space used: 10453594668
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)