BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZD09FM1.SCF screened BAC_end (1003 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1775 1235 0.0 >3x_Contig1775 Length = 26320 Score = 1235 bits (623), Expect = 0.0 Identities = 701/718 (97%), Gaps = 7/718 (0%) Strand = Plus / Plus Query: 88 tcataccatttcgtttccgtctccttcttttgatgtccttcatcgcgggccactattctg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23941 tcataccatttcgtttccgtctccttcttttgatgtccttcatcgcgggccactattctg 24000 Query: 148 gaagatctctttcttctgaccattagagcttgcatagactgttgtttcaatctgttagca 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24001 gaagatctctttcttctgaccattagagcttgcatagactgttgtttcaatctgttagca 24060 Query: 208 tacaatttacgtccgtaatcctctgcctctgcatggtattctattaagccttggaaaaat 267 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 24061 tacaatttacgtccgtaaacctctgcctctgcatggtattctattaagccttggaaaaat 24120 Query: 268 tcttgaaaatcaatatcatctatcgtttgtagatattcgacgaagcttctataatcatgt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24121 tcttgaaaatcaatatcatctatcgtttgtagatattcgacgaagcttctataatcatgt 24180 Query: 328 gctaacgtttcataatcgatcttgacatcatttaaataggcgtcgatctcatcggaataa 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24181 gctaacgtttcataatcgatcttgacatcatttaaataggcgtcgatctcatcggaataa 24240 Query: 388 tccaaatgaattacgtctatagtggcttctgtctcttcgacaagaacacaattctgtaac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24241 tccaaatgaattacgtctatagtggcttctgtctcttcgacaagaacacaattctgtaac 24300 Query: 448 tttataggtatgttcaatccgtttgattctggtttgaccgatacctgtttccttataatc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24301 tttataggtatgttcaatccgtttgattctggtttgaccgatacctgtttccttataatc 24360 Query: 508 tttccagtgggtaagaccaccaaagaggtagcatcattctcccaaatctcagggaattgg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24361 tttccagtgggtaagaccaccaaagaggtagcatcattctcccaaatctcagggaattgg 24420 Query: 568 aagctatccaaatggttttgtaaatagttcctanaaccaatgttctttctttct-ccaat 626 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 24421 aagctatccaaatggttttgtaaatagttcctaaaaccaatgttctttctttctaccaat 24480 Query: 627 ttaatgaccatgg-aaatgatctcgaactggtttaatatgttgagatccgcgaatttgct 685 ||||||| ||||| |||||||||||||||| | |||||||||||||||||||||| |||| Sbjct: 24481 ttaatga-catggaaaatgatctcgaactgttgtaatatgttgagatccgcgaatctgct 24539 Query: 686 attgatatcctctgtgtaccaaagtagagattttgtttaaatttcgaa-taaaaatgttg 744 |||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||| | Sbjct: 24540 attgatatcctctgtgtaccaaagtagaga-tttgttt-aattccgaattaaaaatgtgg 24597 Query: 745 tacttcactatttcattccaatgtttcaaggatacccgtcttttcctgttcttaagac 802 |||||||||||||||| ||||||||||||||||| ||||||| ||||||||| ||||| Sbjct: 24598 tacttcactatttcatcccaatgtttcaaggata-ccgtcttatcctgttctaaagac 24654 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7418 Number of Sequences: 1807 Number of extensions: 7418 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 1003 length of database: 10,358,551 effective HSP length: 16 effective length of query: 987 effective length of database: 10,329,639 effective search space: 10195353693 effective search space used: 10195353693 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)