BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC2ZD10RM1.SCF screened BAC_end
         (1023 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1572                                                        1483   0.0  

>3x_Contig1572 
          Length = 12810

 Score = 1483 bits (748), Expect = 0.0
 Identities = 775/780 (99%), Gaps = 3/780 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    cttgtttctcctttcgctacttctt-agatttaacaccgacagggtcgtccaatagtgac 101
             ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 12032 cttgtttctcctttcgctacttcttcagatttaacaccgacagggtcgtcgaatagtgac 12091

                                                                         
Query: 102   acgtcaagtgcaatgttgtctaccagtgggacaacttcaagtcattcaaataatgaaaat 161
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12092 acgtcaagtgcaatgttgtctaccagtgggacaacttcaagtcattcaaataatgaaaat 12151

                                                                         
Query: 162   tcaatatctttgaagtatgagggtgattctcagcattctatagactcacaatccgatcat 221
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12152 tcaatatctttgaagtatgagggtgattctcagcattctatagactcacaatccgatcat 12211

                                                                         
Query: 222   atgcaatggaataaaatccatacagccaaatgccatgttggggaaacaatcttcggtaag 281
             | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12212 a-gcaatggaataaaatccatacagccaaatgccatgttggggaaacaatcttcggtaag 12270

                                                                         
Query: 282   tgatccattaaaccagttatccgaagatatttcattggacgtgacaggaaatattcaagg 341
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12271 tgatccattaaaccagttatccgaagatatttcattggacgtgacaggaaatattcaagg 12330

                                                                         
Query: 342   acatgatgctggtgttaaaccggtattatcggctgaaacaagttttaatacgtgttatga 401
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12331 acatgatgctggtgttaaaccggtattatcggctgaaacaagttttaatacgtgttatga 12390

                                                                         
Query: 402   tgaaggatacgctttactaccagatttcttcgcagtaacatcagaagccaaagtggaact 461
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12391 tgaaggatacgctttactaccagatttcttcgcagtaacatcagaagccaaagtggaact 12450

                                                                         
Query: 462   acctattgaatttccagacttgcaaaagtttttaccggtaaatcagtcagttgatcctga 521
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12451 acctattgaatttccagacttgcaaaagtttttaccggtaaatcagtcagttgatcctga 12510

                                                                         
Query: 522   tattgcttccagtgttaactccctataccaagtttattgtaatactttgtttgaaaatat 581
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12511 tattgcttccagtgttaactccctataccaagtttattgtaatactttgtttgaaaatat 12570

                                                                         
Query: 582   acggttcatgaagtttgatgatcttccattaacattgcaatcattttcatcgagttcaat 641
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12571 acggttcatgaagtttgatgatcttccattaacattgcaatcattttcatcgagttcaat 12630

                                                                         
Query: 642   atcatcaaaaatgtacaacttgtttatttctgaagaattgtacagatgggttcatcaatc 701
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12631 atcatcaaaaatgtacaacttgtttatttctgaagaattgtacagatgggttcatcaatc 12690

                                                                         
Query: 702   agacctacttactcacaaggctctgaccaagatgctttcgagtttgattgttgacttcaa 761
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12691 agacctacttactcacaaggctctgaccaagatgctttcgagtttgattgttgacttcaa 12750

                                                                         
Query: 762   cgaaattccagaagttgtgttcaacaaattgtcagacttttc-aatgagtatatgaagat 820
             |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12751 cgaaattccagaggttgtgttcaacaaattgtcagacttttcaaatgagtatatgaagat 12810


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8871
Number of Sequences: 1807
Number of extensions: 8871
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 1023
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1007
effective length of database: 10,329,639
effective search space: 10401946473
effective search space used: 10401946473
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)