BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC2ZE04RM1.SCF screened BAC_end
         (1030 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1807                                                        1746   0.0  

>3x_Contig1807 
          Length = 66587

 Score = 1746 bits (881), Expect = 0.0
 Identities = 931/947 (98%), Gaps = 1/947 (0%)
 Strand = Plus / Plus

                                                                         
Query: 47    aagaaactgcttggagcacaattcactaccgtataaatactttgcaatgcaggtaaacgg 106
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41450 aagaaactgcttggagcacaattcactaccgtataaatactttgcaatgcaggtaaacgg 41509

                                                                         
Query: 107   taaatcactgaccaattgtagaggatcgatatcggaaatctgttcagtatcaaggtcttt 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41510 taaatcactgaccaattgtagaggatcgatatcggaaatctgttcagtatcaaggtcttt 41569

                                                                         
Query: 167   aatccactcagaaatataatcgatcattactgggaagttttcgacggctgccttatgtgt 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41570 aatccactcagaaatataatcgatcattactgggaagttttcgacggctgccttatgtgt 41629

                                                                         
Query: 227   gaaaaaggaatcaaaaactttcctcatgcttaaccactctgaaccgttctggaaacctag 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41630 gaaaaaggaatcaaaaactttcctcatgcttaaccactctgaaccgttctggaaacctag 41689

                                                                         
Query: 287   gcattcgccaagaagagccactagaaacgctccagccccaaagctatctagcttactatg 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41690 gcattcgccaagaagagccactagaaacgctccagccccaaagctatctagcttactatg 41749

                                                                         
Query: 347   gtttttactgttggatttataatattccatcagttgctttggagttgttaagacaatctc 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41750 gtttttactgttggatttataatattccatcagttgctttggagttgttaagacaatctc 41809

                                                                         
Query: 407   cttataggtgccgcttctctgcaaatacaggtcaccacactggtctctgtttttgataga 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41810 cttataggtgccgcttctctgcaaatacaggtcaccacactggtctctgtttttgataga 41869

                                                                         
Query: 467   caagcttttgccgtccaagaatttggttcttgcgcagttttctttgttgtaaggcaacgt 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41870 caagcttttgccgtccaagaatttggttcttgcgcagttttctttgttgtaaggcaacgt 41929

                                                                         
Query: 527   cttgcgctcatacccaaaaggagcggcgacggtctgtcccaaattattaaatccatatgc 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41930 cttgcgctcatacccaaaaggagcggcgacggtctgtcccaaattattaaatccatatgc 41989

                                                                         
Query: 587   agctcgccattctttgagcaggtataaaacgacgaaaagaactggcgtaaaatatacaaa 646
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41990 agctcgccattctttgagcaggtataaaacgacgaaaagaactggcgtaaaatatacaaa 42049

                                                                         
Query: 647   agccatccagttcttcttgattaatgggattaatatatcagctaacatttctttcctgtt 706
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42050 agccatccagttcttcttgattaatgggattaatatatcagctaacatttctttcctgtt 42109

                                                                         
Query: 707   gcgcttcaattgtctgttctttgagtatcgttagggctagaaaaaaagacacctgaaagg 766
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 42110 gcgcttcaattgtctgttctttgagtatcgttagggctagaaaaaaagacacctgaaggt 42169

                                                                         
Query: 767   tttccattagcataagaagagacggttatcgattaaaaaagcacagtatttatagccttc 826
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42170 tttccattagcataagaagagacggttatcgattaaaaaagcacagtatttatagccttc 42229

                                                                         
Query: 827   atcctacgacagntatgaatattgaagagctaaagaaaatagctggntggctaga-ttta 885
             |||||||||||| |||||  |||||||||||||||||||||||||| |||||||| ||||
Sbjct: 42230 atcctacgacagttatgataattgaagagctaaagaaaatagctggttggctagatttta 42289

                                                                         
Query: 886   gcttccatatgactgctataacgatattaacctgtcttttaccataacctcaaaccgatt 945
             |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| 
Sbjct: 42290 gcttccatatgactgcaataacgatattaacctgtcttttacaataacctcaaaccgata 42349

                                                            
Query: 946   tgatttaccgtgcattcttgaaaaaatttgccaacagattttcagtt 992
             ||||||||||||||||||  |||||  |||||||||| ||| |||||
Sbjct: 42350 tgatttaccgtgcattctgcaaaaatattgccaacagttttccagtt 42396


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7185
Number of Sequences: 1807
Number of extensions: 7185
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 1030
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1014
effective length of database: 10,329,639
effective search space: 10474253946
effective search space used: 10474253946
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)