BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZE05FM1.SCF screened BAC_end (973 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1757 886 0.0 >3x_Contig1757 Length = 24754 Score = 886 bits (447), Expect = 0.0 Identities = 505/523 (96%), Gaps = 1/523 (0%) Strand = Plus / Plus Query: 88 aaggcagattactctattttcattacccggacttgcccaccctgatatcccgtgcttcaa 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18239 aaggcagattactctattttcattacccggacttgcccaccctgatatcccgtgcttcaa 18298 Query: 148 gtacatttccttccccatgaatggctctcgaccgatatctcgacgaggaaattgtaagtg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18299 gtacatttccttccccatgaatggctctcgaccgatatctcgacgaggaaattgtaagtg 18358 Query: 208 aaaaaaaaat-atttatattaaaaaacttctcacagctcaatatatacagcttgtcttga 266 |||||||||| || | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 18359 aaaaaaaaataataaaaaaaaaaaaacttctcacagctcaatatatacagcttgtcttga 18418 Query: 267 acttctttaactattgacttctttaccttcttcaacttctgtttacattcccactatttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18419 acttctttaactattgacttctttaccttcttcaacttctgtttacattcccactatttg 18478 Query: 327 tctaatttattttatacaatttaactttgattcttacccataattgctgtttctctgtgt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18479 tctaatttattttatacaatttaactttgattcttacccataattgctgtttctctgtgt 18538 Query: 387 ttgctgaatcattacttgactgtactaaggattaaacatcgtgggttacacatttgaaca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18539 ttgctgaatcattacttgactgtactaaggattaaacatcgtgggttacacatttgaaca 18598 Query: 447 tatttatacacatcatacacaatgcatatgagagctgctacaaggaataacgtaacgaac 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18599 tatttatacacatcatacacaatgcatatgagagctgctacaaggaataacgtaacgaac 18658 Query: 507 aagttgttcatgactacttttctggccgcattttccagcgtggaattaatttcggggttg 566 | ||||||||||||||||||||||| ||||||||| ||||||| ||| | ||||| |||| Sbjct: 18659 aggttgttcatgactacttttctggtcgcattttcgagcgtggcattgagttcggcgttg 18718 Query: 567 ccatggcctaaccaaaccttagattctgattctccagttcttg 609 ||||| |||| ||| || |||||||||||||||||||||||| Sbjct: 18719 ccatgtcctagccatacactagattctgattctccagttcttg 18761 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,708 Number of Sequences: 1807 Number of extensions: 18708 Number of successful extensions: 446 Number of sequences better than 1.0e-20: 1 length of query: 973 length of database: 10,358,551 effective HSP length: 16 effective length of query: 957 effective length of database: 10,329,639 effective search space: 9885464523 effective search space used: 9885464523 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)