BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZE06RM1.SCF screened BAC_end (974 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1288 1518 0.0 >3x_Contig1288 Length = 8015 Score = 1518 bits (766), Expect = 0.0 Identities = 833/847 (98%), Gaps = 7/847 (0%) Strand = Plus / Minus Query: 47 ttctgttcttccctgtctcgagctgagcacaatccctgccaacattctagcagcaaaagc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2733 ttctgttcttccctgtctcgagctgagcacaatccctgccaacattctagcagcaaaagc 2674 Query: 107 ggttccatgactttttgataatcagagaccgatgaaaatgagtccttcacgtcagagtag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2673 ggttccatgactttttgataatcagagaccgatgaaaatgagtccttcacgtcagagtag 2614 Query: 167 gatgtttctgtatcggttgggtactcactggttcttttgtagtcccatttcaaaactttc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2613 gatgtttctgtatcggttgggtactcactggttcttttgtagtcccatttcaaaactttc 2554 Query: 227 tcgtagaatggggccaaatcaacatttaatctttgcctcatattctcttcttctaagcga 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2553 tcgtagaatggggccaaatcaacatttaatctttgcctcatattctcttcttctaagcga 2494 Query: 287 cgtaaatcagttggggtcattgactttttgatttctttaccgttgatgtcaagcagacct 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2493 cgtaaatcagttggggtcattgactttttgatttctttaccgttgatgtcaagcagacct 2434 Query: 347 ggtgaaaaagctttagctttagatttcgcaacagcgaagagctcggcagcattttcgaag 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2433 ggtgaaaaagctttagctttagatttcgcaacagcgaagagctcggcagcattttcgaag 2374 Query: 407 tcactttcatcctcgctactgctatcctctttcttcggttgcaatgttggtcttgtattg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2373 tcactttcatcctcgctactgctatcctctttcttcggttgcaatgttggtcttgtattg 2314 Query: 467 aaaacttgactttgagcaggatgaattacacgcttttcaataagctttttcctttccagt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2313 aaaacttgactttgagcaggatgaattacacgcttttcaataagctttttcctttccagt 2254 Query: 527 tcaaatctagataagggcttgggagcaggcgcactaacagttggcgtaccacctggtttg 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2253 tcaaatctagataagggcttgggagcaggcgcactaacagttggcgtaccacctggtttg 2194 Query: 587 aagaaaccatatgatgaaagggttgactgacccttaggacgagaaagaagcgatgaacct 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2193 aagaaaccatatgatgaaagggttgactgacccttaggacgagaaagaagcgatgaacct 2134 Query: 647 atatttgcctttttcaacattgaatcagcacgctggccagaagtcatggatggtttattc 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2133 atatttgcctttttcaacattgaatcagcacgctggccagaagtcatggatggtttattc 2074 Query: 707 ggttgctgctgaacagtagagatggtagctnnttgatcctgtnaggatccagaaggttta 766 |||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| Sbjct: 2073 ggttgctgctgaacagtagagatggtagcttttgattcctgtaaggatccagaaggttta 2014 Query: 767 gtaccctttttcagtaatgctttttct-agtgatacttttcagattcttt-acaacttcg 824 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 2013 gtaccctttttcagtaatgctttttctaagtgatacttttcagattctttaacaacttcg 1954 Query: 825 -ttgtcaaggctttgttg-agtaac-ggatctttc-aggagctc-tggctctgagccgct 879 ||||||||||||||||| |||||| ||||||||| || ||||| ||||||||||||||| Sbjct: 1953 tttgtcaaggctttgttgaagtaacgggatctttcaagaagctcttggctctgagccgct 1894 Query: 880 gaaagtt 886 ||||||| Sbjct: 1893 gaaagtt 1887 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7022 Number of Sequences: 1807 Number of extensions: 7022 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 974 length of database: 10,358,551 effective HSP length: 16 effective length of query: 958 effective length of database: 10,329,639 effective search space: 9895794162 effective search space used: 9895794162 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)