BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC2ZE06RM1.SCF screened BAC_end
         (974 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1288                                                        1518   0.0  

>3x_Contig1288 
          Length = 8015

 Score = 1518 bits (766), Expect = 0.0
 Identities = 833/847 (98%), Gaps = 7/847 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   ttctgttcttccctgtctcgagctgagcacaatccctgccaacattctagcagcaaaagc 106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2733 ttctgttcttccctgtctcgagctgagcacaatccctgccaacattctagcagcaaaagc 2674

                                                                        
Query: 107  ggttccatgactttttgataatcagagaccgatgaaaatgagtccttcacgtcagagtag 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673 ggttccatgactttttgataatcagagaccgatgaaaatgagtccttcacgtcagagtag 2614

                                                                        
Query: 167  gatgtttctgtatcggttgggtactcactggttcttttgtagtcccatttcaaaactttc 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2613 gatgtttctgtatcggttgggtactcactggttcttttgtagtcccatttcaaaactttc 2554

                                                                        
Query: 227  tcgtagaatggggccaaatcaacatttaatctttgcctcatattctcttcttctaagcga 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2553 tcgtagaatggggccaaatcaacatttaatctttgcctcatattctcttcttctaagcga 2494

                                                                        
Query: 287  cgtaaatcagttggggtcattgactttttgatttctttaccgttgatgtcaagcagacct 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2493 cgtaaatcagttggggtcattgactttttgatttctttaccgttgatgtcaagcagacct 2434

                                                                        
Query: 347  ggtgaaaaagctttagctttagatttcgcaacagcgaagagctcggcagcattttcgaag 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2433 ggtgaaaaagctttagctttagatttcgcaacagcgaagagctcggcagcattttcgaag 2374

                                                                        
Query: 407  tcactttcatcctcgctactgctatcctctttcttcggttgcaatgttggtcttgtattg 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2373 tcactttcatcctcgctactgctatcctctttcttcggttgcaatgttggtcttgtattg 2314

                                                                        
Query: 467  aaaacttgactttgagcaggatgaattacacgcttttcaataagctttttcctttccagt 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2313 aaaacttgactttgagcaggatgaattacacgcttttcaataagctttttcctttccagt 2254

                                                                        
Query: 527  tcaaatctagataagggcttgggagcaggcgcactaacagttggcgtaccacctggtttg 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2253 tcaaatctagataagggcttgggagcaggcgcactaacagttggcgtaccacctggtttg 2194

                                                                        
Query: 587  aagaaaccatatgatgaaagggttgactgacccttaggacgagaaagaagcgatgaacct 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2193 aagaaaccatatgatgaaagggttgactgacccttaggacgagaaagaagcgatgaacct 2134

                                                                        
Query: 647  atatttgcctttttcaacattgaatcagcacgctggccagaagtcatggatggtttattc 706
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2133 atatttgcctttttcaacattgaatcagcacgctggccagaagtcatggatggtttattc 2074

                                                                        
Query: 707  ggttgctgctgaacagtagagatggtagctnnttgatcctgtnaggatccagaaggttta 766
            ||||||||||||||||||||||||||||||  |   |||||| |||||||||||||||||
Sbjct: 2073 ggttgctgctgaacagtagagatggtagcttttgattcctgtaaggatccagaaggttta 2014

                                                                        
Query: 767  gtaccctttttcagtaatgctttttct-agtgatacttttcagattcttt-acaacttcg 824
            ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 2013 gtaccctttttcagtaatgctttttctaagtgatacttttcagattctttaacaacttcg 1954

                                                                        
Query: 825  -ttgtcaaggctttgttg-agtaac-ggatctttc-aggagctc-tggctctgagccgct 879
             ||||||||||||||||| |||||| ||||||||| || ||||| |||||||||||||||
Sbjct: 1953 tttgtcaaggctttgttgaagtaacgggatctttcaagaagctcttggctctgagccgct 1894

                   
Query: 880  gaaagtt 886
            |||||||
Sbjct: 1893 gaaagtt 1887


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7022
Number of Sequences: 1807
Number of extensions: 7022
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 974
length of database: 10,358,551
effective HSP length: 16
effective length of query: 958
effective length of database: 10,329,639
effective search space: 9895794162
effective search space used: 9895794162
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)