BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZE08FM1.SCF screened BAC_end (1034 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1320 1524 0.0 >3x_Contig1320 Length = 7350 Score = 1524 bits (769), Expect = 0.0 Identities = 829/841 (98%), Gaps = 6/841 (0%) Strand = Plus / Minus Query: 86 tatcgaacgttacatatttccaaacctctcctatatcgagaaaaatgccacttccacctg 145 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4825 tatcgaacgttagatatttccaaacctctcctatatcgagaaaaatgccacttccacctg 4766 Query: 146 ttcttgaatcacgtcgtcccaaagaatctccggaattcgactattctacactttccaatt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4765 ttcttgaatcacgtcgtcccaaagaatctccggaattcgactattctacactttccaatt 4706 Query: 206 acaagtctttcaaggtaaagcattcacagttggatgttagcgttgatttcaaaaagaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4705 acaagtctttcaaggtaaagcattcacagttggatgttagcgttgatttcaaaaagaaaa 4646 Query: 266 ccattagtggttctgtctcttacgagattgaaaaggtgaagaaggatgaaaacactatca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4645 ccattagtggttctgtctcttacgagattgaaaaggtgaagaaggatgaaaacactatca 4586 Query: 326 agttggatacttcttacttgaagatctctaaagtcaaagtggatgatgaagacgacgtga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4585 agttggatacttcttacttgaagatctctaaagtcaaagtggatgatgaagacgacgtga 4526 Query: 386 agtttaaattgttagaaagaaaacatccattgggtgctcagttaattgttagtccatctt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4525 agtttaaattgttagaaagaaaacatccattgggtgctcagttaattgttagtccatctt 4466 Query: 446 ctttgccggaaatattccatttgtgcttacaattttcgacaactgcagactgtacagcat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4465 ctttgccggaaatattccatttgtgcttacaattttcgacaactgcagactgtacagcat 4406 Query: 506 tgcaatggcttgatgaacaccaaacatctgggaaaccgtacgttttctctcaattggaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4405 tgcaatggcttgatgaacaccaaacatctgggaaaccgtacgttttctctcaattggaag 4346 Query: 566 ccatccatgcgagaagtctattcacatgttttgataccccaagtgtaaaatctacatatc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4345 ccatccatgcgagaagtctattcacatgttttgataccccaagtgtaaaatctacatatc 4286 Query: 626 tcgccaacatcaagtctgaattaccagttgtgttttcgggtatccaaacaggttacgatg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4285 tcgccaacatcaagtctgaattaccagttgtgttttcgggtatccaaacaggttacgatg 4226 Query: 686 attctactaaggtctactctttcaagcaagaagtaccaattccagcatatttgatcggta 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4225 attctactaaggtctactctttcaagcaagaagtaccaattccagcatatttgatcggta 4166 Query: 746 tcgcatcaggtgatttggccagcgctgatattggtcctcgttccaaag-ttacgtgggac 804 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 4165 tcgcatcaggtgatttggccagcgctgatattggtcctcgttccaaagtttacgtggaac 4106 Query: 805 cttatcggttaaaggacgcccagttgggatttgatggtgatgttg-aaaattcatta-ca 862 ||||||| |||||||||||||||| || ||||||||||||||||| ||||||||||| || Sbjct: 4105 cttatcgtttaaaggacgcccagtgggaatttgatggtgatgttgaaaaattcattacca 4046 Query: 863 ctgctgaaga-aacattttcaaat-cgaatggggcacctacgaca-tttggtgaacccaa 919 |||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 4045 ctgctgaagacatcattttcaaatacgaatggggcacctacgacattttggtgaacccaa 3986 Query: 920 a 920 | Sbjct: 3985 a 3985 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7567 Number of Sequences: 1807 Number of extensions: 7567 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 1034 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1018 effective length of database: 10,329,639 effective search space: 10515572502 effective search space used: 10515572502 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)