BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZE11FM1.SCF screened BAC_end (983 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig914 1612 0.0 >3x_Contig914 Length = 2833 Score = 1612 bits (813), Expect = 0.0 Identities = 870/888 (97%), Gaps = 1/888 (0%) Strand = Plus / Plus Query: 87 taatgctcaatagtttcttcgttgttgatccccataagtttagtaacacccttttcagta 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1571 taatgctcaatagtttcttcgttgttgatccccataagtttagtaacacccttttcagta 1630 Query: 147 cgtagttcttgaagtttagcgaaatcggctggtgttaagatacgactggatgctaattca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1631 cgtagttcttgaagtttagcgaaatcggctggtgttaagatacgactggatgctaattca 1690 Query: 207 cggaaagcttctttttttttagcggattcactttcttccttctgctcttctcccaccttt 266 ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 1691 cggaaagcttcttctgggtcagcggattcactttcttccttctgctcttctcccaccttt 1750 Query: 267 ggttcttcttcatcaccggataattctaaatcactatcttcaccagcttccggttcgact 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1751 ggttcttcttcatcaccggataattctaaatcactatcttcaccagcttccggttcgact 1810 Query: 327 tcatcgtgggaacgtttcttacccttatgacctgttttgttcttgctttcctcatcgtca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1811 tcatcgtgggaacgtttcttacccttatgacctgttttgttcttgctttcctcatcgtca 1870 Query: 387 gagtccatgtcaacttcgtactctttatcgctttctatcgtcacccactcaccttctaca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1871 gagtccatgtcaacttcgtactctttatcgctttctatcgtcacccactcaccttctaca 1930 Query: 447 tccgaagcatctgataattcatcccggttgttcaaatcccatgcagcctcatcatcatca 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1931 tccgaagcatctgataattcatcccggttgttcaaatcccatgcagcctcatcatcatca 1990 Query: 507 tcctcctcgtttccgttctcacgcttccacttcgctagtaactcaataccatctatacct 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1991 tcctcctcgtttccgttctcacgcttccacttcgctagtaactcaataccatctatacct 2050 Query: 567 tgtacattagtagtctcgacaccaaacttgacacgtttggattccctgccattgcgtttg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2051 tgtacattagtagtctcgacaccaaacttgacacgtttggattccctgccattgcgtttg 2110 Query: 627 tcgtcctgtagtcccatagaagcggtcttaccacgatctttcttctttaacatctccgga 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2111 tcgtcctgtagtcccatagaagcggtcttaccacgatctttcttctttaacatctccgga 2170 Query: 687 gcaacttctctgtataatgcaatcaaacccttagcagcaatggcgacactcttggccttg 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2171 gcaacttctctgtataatgcaatcaaacccttagcagcaatggcgacactcttggccttg 2230 Query: 747 gagcccttatattcggttaaatcttgtagtanagtctcatcgatagctaatggggcacga 806 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2231 gagcccttatattcggttaaatcttgtagtaaagtctcatcgatagctaatggggcacga 2290 Query: 807 gtcaagatttctctgactgtattcaaacccacagtggcaacctcatttgaaacaccgtcg 866 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2291 gtcaagatttctctgactgtattcaaacccacagtggcaacctcatttgaaacaccgtcg 2350 Query: 867 tttacaaactcggttggctatcttccttcacatcacttcaatggcctctggaggaaccag 926 | |||||||| ||||||||||||||| |||||||||||||| |||||||||||| || Sbjct: 2351 ctaacaaactc-gttggctatcttcctcaccatcacttcaatggtctctggaggaacaag 2409 Query: 927 atcatgacaggattgggctgcaccaaatagaattctggtaacgtccct 974 |||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct: 2410 atcatgacaggattgggctgcagcagatagaatcttggtaacgtccct 2457 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7264 Number of Sequences: 1807 Number of extensions: 7264 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 983 length of database: 10,358,551 effective HSP length: 16 effective length of query: 967 effective length of database: 10,329,639 effective search space: 9988760913 effective search space used: 9988760913 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)