BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZF01RM1.SCF screened BAC_end (1047 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1479 1057 0.0 >3x_Contig1479 Length = 7316 Score = 1057 bits (533), Expect = 0.0 Identities = 620/643 (96%), Gaps = 5/643 (0%) Strand = Plus / Plus Query: 49 aagcttgaagatactatctatgatgcggcaaagcaaatcttggattatgaangcttctca 108 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3071 aagcttgaagatactatctatgatgcggcaaagcaaatcttggattatgaa-gcttctca 3129 Query: 109 aaaataagtttagggcttattcaataatatgtcatgccgaatgagtttctcataaacttg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3130 aaaataagtttagggcttattcaataatatgtcatgccgaatgagtttctcataaacttg 3189 Query: 169 aactatagttttgcacatagcgtttataaagttttaagctttttcaatgtatctcgggct 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3190 aactatagttttgcacatagcgtttataaagttttaagctttttcaatgtatctcgggct 3249 Query: 229 atgctcttacattttagatcgacgttggtggccaggtcatacctcaaacttaaatcttac 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3250 atgctcttacattttagatcgacgttggtggccaggtcatacctcaaacttaaatcttac 3309 Query: 289 aagagtttaatttaattttactatagtttacatattcagatggaacgtcttttatggatc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3310 aagagtttaatttaattttactatagtttacatattcagatggaacgtcttttatggatc 3369 Query: 349 tacattatctttaccagtgctctgttatgaacgtcaacttacatgcagccaaaacctatt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3370 tacattatctttaccagtgctctgttatgaacgtcaacttacatgcagccaaaacctatt 3429 Query: 409 gggcatatcagcaaggcaaatatgaggacaaaatgactgtcgataagaacaganataggt 468 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3430 gggcatatcagcaaggcaaatatgaggacaaaatgactgtcgataagaacagaaataggt 3489 Query: 469 aaaaggaaaaaaaagaggattattaactgatagtgagtatcagcattctgataaaagatc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3490 aaaaggaaaaaaaagaggattattaactgatagtgagtatcagcattctgataaaagatc 3549 Query: 529 anattttgttttcataccgtttggatttttctcatagttcgtgaattattcgaattgatt 588 | | ||||||||||||||||||||| |||||||||||||||||| ||||||| | ||| Sbjct: 3550 aaa-tttgttttcataccgtttgga-ttttctcatagttcgtgatatattcgattgaatt 3607 Query: 589 catggtattattcacctttataccatgtttgaatgttatgaagtaaaacctaaaccattg 648 |||||||| | || ||||||| |||||||||||| ||||| |||||||||||| || || Sbjct: 3608 catggtatattccaactttataacatgtttgaatg-tatgaggtaaaacctaaaacaatg 3666 Query: 649 gttggaacatttttcaaaggaattgcaaaatgatccttttttc 691 |||||||||| ||||||| ||| ||||||||||||||| |||| Sbjct: 3667 gttggaacatctttcaaa-gaagtgcaaaatgatccttctttc 3708 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9952 Number of Sequences: 1807 Number of extensions: 9952 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 1047 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1031 effective length of database: 10,329,639 effective search space: 10649857809 effective search space used: 10649857809 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)