BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC2ZF02FM1.SCF screened BAC_end
         (1015 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1682                                                        1170   0.0  

>3x_Contig1682 
          Length = 16889

 Score = 1170 bits (590), Expect = 0.0
 Identities = 615/622 (98%), Gaps = 1/622 (0%)
 Strand = Plus / Minus

                                                                        
Query: 97   tttccaaagattgtc-caggtcccgtcattctttgtatcgctttcagtcttatcaaatca 155
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7357 tttccaaagattgtcacaggtcccgtcattctttgtatcgctttcagtcttatcaaatca 7298

                                                                        
Query: 156  gggttcagcgactgggccggtggttcaggatgtgttggtgccatttgtccctcagaaggt 215
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7297 gggttcagcgactgggccggtggttcaggatgtgttggtgccatttgtccctcagaaggt 7238

                                                                        
Query: 216  gctcccatggcaggtgactgtttgtctgcccgtttcgtcggtttgggtttcttggtgttt 275
            ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 7237 gctcccatggcaggtgactgggggtctgcccgtttcgtcggtttgggtttcttggtgttt 7178

                                                                        
Query: 276  tccactattatcatctttgagaagtacggtgctccaatcatgaaatcatgtgctgtcatc 335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7177 tccactattatcatctttgagaagtacggtgctccaatcatgaaatcatgtgctgtcatc 7118

                                                                        
Query: 336  cttggtttgttggttggttgtatcgttgctgcagcatgtggctactttaacaaaacctcc 395
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7117 cttggtttgttggttggttgtatcgttgctgcagcatgtggctactttaacaaaacctcc 7058

                                                                        
Query: 396  atagatgctgctcctggtggaacattcatctgggttcacacgtttaagctttcggtgtat 455
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7057 atagatgctgctcctggtggaacattcatctgggttcacacgtttaagctttcggtgtat 6998

                                                                        
Query: 456  ggacctgctgtgttgccgatgttagttttatatatcgtcttggcaacagaagctatgggt 515
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6997 ggacctgctgtgttgccgatgttagttttatatatcgtcttggcaacagaagctatgggt 6938

                                                                        
Query: 516  gatttgacagctacttgtgacgtgtctagattggaaacggaaggtgctgaatacgaatca 575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6937 gatttgacagctacttgtgacgtgtctagattggaaacggaaggtgctgaatacgaatca 6878

                                                                        
Query: 576  agaattcaaggtggtgtgctttgtgatggtctcagtggtattctttctggtttgtgtacc 635
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6877 agaattcaaggtggtgtgctttgtgatggtctcagtggtattctttctggtttgtgtacc 6818

                                                                        
Query: 636  ataaccccaatgtctacctttgcacagaacaatggtggcatttcaattactaaatgtgct 695
            |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 6817 ataaccccaatgtctaccttcgcacagaacaatggtgtcatttcaattactaaatgtgct 6758

                                  
Query: 696  agcagacaagttggctactggt 717
            ||||||||||| ||||||||||
Sbjct: 6757 agcagacaagtcggctactggt 6736


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,174
Number of Sequences: 1807
Number of extensions: 14174
Number of successful extensions: 92
Number of sequences better than 1.0e-20: 1
length of query: 1015
length of database: 10,358,551
effective HSP length: 16
effective length of query: 999
effective length of database: 10,329,639
effective search space: 10319309361
effective search space used: 10319309361
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)