BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZF02FM1.SCF screened BAC_end (1015 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1682 1170 0.0 >3x_Contig1682 Length = 16889 Score = 1170 bits (590), Expect = 0.0 Identities = 615/622 (98%), Gaps = 1/622 (0%) Strand = Plus / Minus Query: 97 tttccaaagattgtc-caggtcccgtcattctttgtatcgctttcagtcttatcaaatca 155 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7357 tttccaaagattgtcacaggtcccgtcattctttgtatcgctttcagtcttatcaaatca 7298 Query: 156 gggttcagcgactgggccggtggttcaggatgtgttggtgccatttgtccctcagaaggt 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7297 gggttcagcgactgggccggtggttcaggatgtgttggtgccatttgtccctcagaaggt 7238 Query: 216 gctcccatggcaggtgactgtttgtctgcccgtttcgtcggtttgggtttcttggtgttt 275 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 7237 gctcccatggcaggtgactgggggtctgcccgtttcgtcggtttgggtttcttggtgttt 7178 Query: 276 tccactattatcatctttgagaagtacggtgctccaatcatgaaatcatgtgctgtcatc 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7177 tccactattatcatctttgagaagtacggtgctccaatcatgaaatcatgtgctgtcatc 7118 Query: 336 cttggtttgttggttggttgtatcgttgctgcagcatgtggctactttaacaaaacctcc 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7117 cttggtttgttggttggttgtatcgttgctgcagcatgtggctactttaacaaaacctcc 7058 Query: 396 atagatgctgctcctggtggaacattcatctgggttcacacgtttaagctttcggtgtat 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7057 atagatgctgctcctggtggaacattcatctgggttcacacgtttaagctttcggtgtat 6998 Query: 456 ggacctgctgtgttgccgatgttagttttatatatcgtcttggcaacagaagctatgggt 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6997 ggacctgctgtgttgccgatgttagttttatatatcgtcttggcaacagaagctatgggt 6938 Query: 516 gatttgacagctacttgtgacgtgtctagattggaaacggaaggtgctgaatacgaatca 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6937 gatttgacagctacttgtgacgtgtctagattggaaacggaaggtgctgaatacgaatca 6878 Query: 576 agaattcaaggtggtgtgctttgtgatggtctcagtggtattctttctggtttgtgtacc 635 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6877 agaattcaaggtggtgtgctttgtgatggtctcagtggtattctttctggtttgtgtacc 6818 Query: 636 ataaccccaatgtctacctttgcacagaacaatggtggcatttcaattactaaatgtgct 695 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 6817 ataaccccaatgtctaccttcgcacagaacaatggtgtcatttcaattactaaatgtgct 6758 Query: 696 agcagacaagttggctactggt 717 ||||||||||| |||||||||| Sbjct: 6757 agcagacaagtcggctactggt 6736 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,174 Number of Sequences: 1807 Number of extensions: 14174 Number of successful extensions: 92 Number of sequences better than 1.0e-20: 1 length of query: 1015 length of database: 10,358,551 effective HSP length: 16 effective length of query: 999 effective length of database: 10,329,639 effective search space: 10319309361 effective search space used: 10319309361 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)