BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZF02RM1.SCF screened BAC_end (1049 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1303 1544 0.0 >3x_Contig1303 Length = 8112 Score = 1544 bits (779), Expect = 0.0 Identities = 938/981 (95%), Gaps = 8/981 (0%) Strand = Plus / Plus Query: 47 tgttgaaggagcactacgctgacttggtttc-aagcc-ttcttcc-atctctattgtctt 103 ||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 4232 tgttgaaggagcactacgctgacttggtttccaagccattcttcccatctctattgtctt 4291 Query: 104 acatgacttctggtccagttttagctactgtctgggaaggtaaggatgttgttaagcaag 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4292 acatgacttctggtccagttttagctactgtctgggaaggtaaggatgttgttaagcaag 4351 Query: 164 gtcgtgctatcttgggtgctaccaacccattgcaatctgctccaggtaccatcagaggtg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4352 gtcgtgctatcttgggtgctaccaacccattgcaatctgctccaggtaccatcagaggtg 4411 Query: 224 actttgccattgaagttggtagaaatgtctgtcacggttctgactctgttgaatctgctg 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4412 actttgccattgaagttggtagaaatgtctgtcacggttctgactctgttgaatctgctg 4471 Query: 284 aaaaggaaatcggcttgtggttcaagaaggaagaacttattgactacaagttgaaccaat 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4472 aaaaggaaatcggcttgtggttcaagaaggaagaacttattgactacaagttgaaccaat 4531 Query: 344 tgtcttggatctacgaataaatgtaacgttgacaaattgttcactttatcaatacatatt 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4532 tgtcttggatctacgaataaatgtaacgttgacaaattgttcactttatcaatacatatt 4591 Query: 404 ctttcccacaattattccatatttaaagatgtcttttcttatatgatgtgtatctgtgtg 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4592 ctttcccacaattattccatatttaaagatgtcttttcttatatgatgtgtatctgtgtg 4651 Query: 464 tcggtatttattactatgtagatatatctcaaatacacacattttgaaatccattaagct 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4652 tcggtatttattactatgtagatatatctcaaatacacacattttgaaatccattaagct 4711 Query: 524 ttatactgcgatgttgtattcatatttgtaaccccgacttgcgttgggtatattcacgtt 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4712 ttatactgcgatgttgtattcatatttgtaaccccgacttgcgttgggtatattcacgtt 4771 Query: 584 tctaccagcttactgatacgattacggttcaatttgcatttatgtttgtcatagtattat 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4772 tctaccagcttactgatacgattacggttcaatttgcatttatgtttgtcatagtattat 4831 Query: 644 tttacttaattgcactaaaaaatttcagttagcacatctgttcttcatcacaaatgcatc 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4832 tttacttaattgcactaaaaaatttcagttagcacatctgttcttcatcacaaatgcatc 4891 Query: 704 tcctaacgaaaacatgagctgttatcacaatacctcagacaagatccnttcataaaactg 763 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 4892 -cctaacgaaaacatgagctgttatcacaatacctcagacaagatccttcagtaaaactg 4950 Query: 764 cgttctttcacgaatgctcttctagaaaagaaatagatagaagtaccccggagaagagtg 823 |||||||||||||||||||| |||||||||||||| || ||| || | ||| ||||| Sbjct: 4951 cgttctttcacgaatgctctctaagaaaagaaatagaaggaggta-ccggaagaggagtg 5009 Query: 824 ctgactcttcccgttgattcaaattatgtatttcganctttaccacccaatttaacagaa 883 |||||||||||||| |||||||||||||| ||||| |||||||||| |||||||||||| Sbjct: 5010 ctgactcttcccgtgaattcaaattatgta-ttcgatctttaccaccaaatttaacagaa 5068 Query: 884 ggagcattccttaagcccttttacagagaacaacttcgatgtgctttcatttcaaaaatt 943 ||||| | | | ||| |||| |||||||||| ||||||||| |||||||||||||| Sbjct: 5069 -gagcaattcatcagcactttacaagagaacaacatcgatgtgcattcatttcaaaaatc 5127 Query: 944 attctactacgtgcaaggtcattactccacaaaggtgttaaggaaacagacttgtgtcta 1003 ||||||||||||||||||||||||||||| |||||||| | ||||||||||| |||||| Sbjct: 5128 attctactacgtgcaaggtcattactccagcaaggtgttcaagaaacagactt-tgtcta 5186 Query: 1004 gggcatttattccattggact 1024 |||||| ||| | |||||||| Sbjct: 5187 gggcatatatccaattggact 5207 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7844 Number of Sequences: 1807 Number of extensions: 7844 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 1049 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1033 effective length of database: 10,329,639 effective search space: 10670517087 effective search space used: 10670517087 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)