BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZF04FM1.SCF screened BAC_end (985 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1680 1528 0.0 >3x_Contig1680 Length = 12597 Score = 1528 bits (771), Expect = 0.0 Identities = 846/865 (97%), Gaps = 6/865 (0%) Strand = Plus / Minus Query: 87 caaaagaacacactctttcctctttgac-acaaggggggtagattacaaagaattacagc 145 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10772 caaaagaacaaactctttcctctttgactacaaggggggtagattacaaagaattacagc 10713 Query: 146 atgtattgtccaatcacttagcattctctaacattcaacaagtgccactctttcaattgc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10712 atgtattgtccaatcacttagcattctctaacattcaacaagtgccactctttcaattgc 10653 Query: 206 aggatgttaactctgttgtttcgaagttaagccgcacagaactgcgcgctattttgaatg 265 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10652 aggatgttaactctgttgtctcgaagttaagccgcacagaactgcgcgctattttgaatg 10593 Query: 266 acgaacaatgtatcggagtaatttaccgtacaggaaaagatgccgcaggaaagccactgg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10592 acgaacaatgtatcggagtaatttaccgtacaggaaaagatgccgcaggaaagccactgg 10533 Query: 326 atgaagaatactactatgatgcagaaaatgatcctgacgatgacagaagacagctggtag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10532 atgaagaatactactatgatgcagaaaatgatcctgacgatgacagaagacagctggtag 10473 Query: 386 catcactcaagggtggcagatctggtttaagatcatgcaggagagtgcataaacagtatt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10472 catcactcaagggtggcagatctggtttaagatcatgcaggagagtgcataaacagtatt 10413 Query: 446 tctggaagaaaccaactaaataatctaaaaattctgctcgacttgctttttaacacaagg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10412 tctggaagaaaccaactaaataatctaaaaattctgctcgacttgctttttaacacaagg 10353 Query: 506 cgtcgaagaaacaaatatatacataggcaataaatgtaatagaaaaaaaaggttcatcgt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10352 cgtcgaagaaacaaatatatacataggcaataaatgtaatagaaaaaaaaggttcatcgt 10293 Query: 566 attttataggtaaaagtccactaaaattacaacagcttgcgtaaactgtttagttagaaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10292 attttataggtaaaagtccactaaaattacaacagcttgcgtaaactgtttagttagaaa 10233 Query: 626 taaaagtacaacaagagttatttccaaataggttaccatcaattggtatttattcggcgg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10232 taaaagtacaacaagagttatttccaaataggttaccatcaattggtatttattcggcgg 10173 Query: 686 cactctctaaaaagttgttcacctcgtctgtatctatatcttcaggatcttcattagata 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10172 cactctctaaaaagttgttcacctcgtctgtatctatatcttcaggatcttcattagata 10113 Query: 746 tagcttgcaaaagaccgtcaagcattgagtcaaccttctcttcatctatctttcagcaga 805 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10112 tagcttgcaaaagaccgtcaagcattgagtcaaccttctcttcatctatcttcaagcaga 10053 Query: 806 gagacaagactttnctgaaattagattctaaattcttctgcttgtctttgatagtctgaa 865 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 10052 gagacaagacttttctgaatttagattctaaattcttctgcttgtctttgatagtctgta 9993 Query: 866 aagttgaggct-aatgcaaatcgtttctattgcacgctttgatctttgctt--agaa-tt 921 |||||||| || ||||||| |||||||||||| |||||||||| |||||| |||| || Sbjct: 9992 aagttgagtctaaatgcaattcgtttctattgtacgctttgattcttgctttaagaattt 9933 Query: 922 tgggatgt-ggaattctgctctgga 945 |||||||| ||| |||||||||||| Sbjct: 9932 tgggatgtgggatttctgctctgga 9908 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6986 Number of Sequences: 1807 Number of extensions: 6986 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 985 length of database: 10,358,551 effective HSP length: 16 effective length of query: 969 effective length of database: 10,329,639 effective search space: 10009420191 effective search space used: 10009420191 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)