BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC2ZF04FM1.SCF screened BAC_end
         (985 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1680                                                        1528   0.0  

>3x_Contig1680 
          Length = 12597

 Score = 1528 bits (771), Expect = 0.0
 Identities = 846/865 (97%), Gaps = 6/865 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    caaaagaacacactctttcctctttgac-acaaggggggtagattacaaagaattacagc 145
             |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 10772 caaaagaacaaactctttcctctttgactacaaggggggtagattacaaagaattacagc 10713

                                                                         
Query: 146   atgtattgtccaatcacttagcattctctaacattcaacaagtgccactctttcaattgc 205
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10712 atgtattgtccaatcacttagcattctctaacattcaacaagtgccactctttcaattgc 10653

                                                                         
Query: 206   aggatgttaactctgttgtttcgaagttaagccgcacagaactgcgcgctattttgaatg 265
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 10652 aggatgttaactctgttgtctcgaagttaagccgcacagaactgcgcgctattttgaatg 10593

                                                                         
Query: 266   acgaacaatgtatcggagtaatttaccgtacaggaaaagatgccgcaggaaagccactgg 325
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10592 acgaacaatgtatcggagtaatttaccgtacaggaaaagatgccgcaggaaagccactgg 10533

                                                                         
Query: 326   atgaagaatactactatgatgcagaaaatgatcctgacgatgacagaagacagctggtag 385
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10532 atgaagaatactactatgatgcagaaaatgatcctgacgatgacagaagacagctggtag 10473

                                                                         
Query: 386   catcactcaagggtggcagatctggtttaagatcatgcaggagagtgcataaacagtatt 445
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10472 catcactcaagggtggcagatctggtttaagatcatgcaggagagtgcataaacagtatt 10413

                                                                         
Query: 446   tctggaagaaaccaactaaataatctaaaaattctgctcgacttgctttttaacacaagg 505
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10412 tctggaagaaaccaactaaataatctaaaaattctgctcgacttgctttttaacacaagg 10353

                                                                         
Query: 506   cgtcgaagaaacaaatatatacataggcaataaatgtaatagaaaaaaaaggttcatcgt 565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10352 cgtcgaagaaacaaatatatacataggcaataaatgtaatagaaaaaaaaggttcatcgt 10293

                                                                         
Query: 566   attttataggtaaaagtccactaaaattacaacagcttgcgtaaactgtttagttagaaa 625
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10292 attttataggtaaaagtccactaaaattacaacagcttgcgtaaactgtttagttagaaa 10233

                                                                         
Query: 626   taaaagtacaacaagagttatttccaaataggttaccatcaattggtatttattcggcgg 685
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10232 taaaagtacaacaagagttatttccaaataggttaccatcaattggtatttattcggcgg 10173

                                                                         
Query: 686   cactctctaaaaagttgttcacctcgtctgtatctatatcttcaggatcttcattagata 745
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10172 cactctctaaaaagttgttcacctcgtctgtatctatatcttcaggatcttcattagata 10113

                                                                         
Query: 746   tagcttgcaaaagaccgtcaagcattgagtcaaccttctcttcatctatctttcagcaga 805
             ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 10112 tagcttgcaaaagaccgtcaagcattgagtcaaccttctcttcatctatcttcaagcaga 10053

                                                                         
Query: 806   gagacaagactttnctgaaattagattctaaattcttctgcttgtctttgatagtctgaa 865
             ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 10052 gagacaagacttttctgaatttagattctaaattcttctgcttgtctttgatagtctgta 9993

                                                                         
Query: 866   aagttgaggct-aatgcaaatcgtttctattgcacgctttgatctttgctt--agaa-tt 921
             |||||||| || ||||||| |||||||||||| ||||||||||  ||||||  |||| ||
Sbjct: 9992  aagttgagtctaaatgcaattcgtttctattgtacgctttgattcttgctttaagaattt 9933

                                      
Query: 922   tgggatgt-ggaattctgctctgga 945
             |||||||| ||| ||||||||||||
Sbjct: 9932  tgggatgtgggatttctgctctgga 9908


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6986
Number of Sequences: 1807
Number of extensions: 6986
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)