BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZF04RM1.SCF screened BAC_end (994 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig304 1768 0.0 >3x_Contig304 Length = 1230 Score = 1768 bits (892), Expect = 0.0 Identities = 936/948 (98%), Gaps = 2/948 (0%) Strand = Plus / Plus Query: 47 tcacttctgtgtcgaagaggcatatgaccttaggaatggaaggtttgttgacgatgctaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 tcacttctgtgtcgaagaggcatatgaccttaggaatggaaggtttgttgacgatgctaa 138 Query: 107 ggacaatttcatatttgatgattctcagatattacccttagatgaggtcgtagaacttgt 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 ggacaatttcatatttgatgattctcagatattacccttagatgaggtcgtagaacttgt 198 Query: 167 ccaaaacctcattgataaatacttgattccacacaacagagcggaacactcttggaaaag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 ccaaaacctcattgataaatacttgattccacacaacagagcggaacactcttggaaaag 258 Query: 227 agcattggttgggcatggtatatcaggggatattagctggctagaatcgttggacataag 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 agcattggttgggcatggtatatcaggggatattagctggctagaatcgttggacataag 318 Query: 287 attaccgaataatgttcaaaccttggatacccaaaaattattcgagaatatgtacggaag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 attaccgaataatgttcaaaccttggatacccaaaaattattcgagaatatgtacggaag 378 Query: 347 acaatcatcactcaagaggctactgaatttatgcagaataccacactcctaccttcataa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 acaatcatcactcaagaggctactgaatttatgcagaataccacactcctaccttcataa 438 Query: 407 cgcggggaatgattcctactacactctacagttacttttgtcaatgtgcgatataggaac 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 cgcggggaatgattcctactacactctacagttacttttgtcaatgtgcgatataggaac 498 Query: 467 aagaatcaagttggatttggacaattggcatcatgtaagaagattagaggagaatttata 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 aagaatcaagttggatttggacaattggcatcatgtaagaagattagaggagaatttata 558 Query: 527 ttgtgtggagcagctcgaaaaacaagggaagcgtaaaagaaatcgtggaaacaatttctc 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 ttgtgtggagcagctcgaaaaacaagggaagcgtaaaagaaatcgtggaaacaatttctc 618 Query: 587 acaacgctaagaaatgcattttttctacaatattcgcgctgatattacagtatatagatg 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 acaacgctaagaaatgcattttttctacaatattcgcgctgatattacagtatatagatg 678 Query: 647 tgcatacgttatgctcatatatatattatattttgctgcccgtaatcacagttcaacctt 706 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 tgcatacgttatgctcatatatatattatattttgctgcccgtaatcacagttcaacctt 738 Query: 707 tcttgtctccagccagaaaatgtttgatttcctactgtttgtcgtacatatgttcgtcta 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 tcttgtctccagccagaaaatgtttgatttcctactgtttgtcgtacatatgttcgtcta 798 Query: 767 cctcacaactttttctaaagtattaaaaaagagagataatttatattcaagagtaataga 826 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 799 cctcacaactttttctaaagtattaaaaaagagagaaaatttatattcaagagtaataga 858 Query: 827 gaaagacggtatagacctaccgatgaggtgaggctctgcaagagcgaagacagaatatcc 886 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 859 gaaagacggtatagacctaccgatgaggtgaggctctgcaagagcgaagacagaatatcg 918 Query: 887 gccccataaactttttcgaaatccgtaatggtcttctgggaagtcctatagaccaggtcc 946 |||| ||||||||||||| | ||||| ||||||||| |||||||||||||||||||| Sbjct: 919 gcccataaaactttttcgaatccggtaat-gtcttctggaaagtcctatagaccaggtcc 977 Query: 947 aaacaatcatcgaactaaatttggc-ttaacattcagaatcataatca 993 ||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 978 aaacaatcatcgaactaaatttggcatcaacattcagaatcataatca 1025 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7345 Number of Sequences: 1807 Number of extensions: 7345 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 994 length of database: 10,358,551 effective HSP length: 16 effective length of query: 978 effective length of database: 10,329,639 effective search space: 10102386942 effective search space used: 10102386942 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)