BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZF05RM1.SCF screened BAC_end (993 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1266 1197 0.0 >3x_Contig1266 Length = 8887 Score = 1197 bits (604), Expect = 0.0 Identities = 613/617 (99%) Strand = Plus / Plus Query: 38 tcaaccttctccccaatttaaggaattagatatcgaagacggactttccagtgatgtaga 97 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8271 tcaagcttctccccaatttaaggaattagatatcgaagacggactttccagtgatgtaga 8330 Query: 98 acctaattctattatgggcacaaaacatgaggataacacacacttaatgaacacaaagga 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8331 acctaattctattatgggcacaaaacatgaggataacacacacttaatgaacacaaagga 8390 Query: 158 tgagcctgtatcttcttcttcctctttaccgtcttccccaagtgaattctctcaaagtgt 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8391 tgagcctgtatcttcttcttcctctttaccgtcttccccaagtgaattctctcaaagtgt 8450 Query: 218 tgcatttggctcgagatctaacatgcaaactcccctacaattaaatggtacgacttcaat 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8451 tgcatttggctcgagatctaacatgcaaactcccctacaattaaatggtacgacttcaat 8510 Query: 278 gaatatgatattaccaaaattttcctcatctcaaaacggaccatctgattcaaaccaaag 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8511 gaatatgatattaccaaaattttcctcatctcaaaacggaccatctgattcaaaccaaag 8570 Query: 338 agcaaacgaatacctatcaaaattggtgaattatttcatatctaatgatacccaaaacga 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8571 agcaaacgaatacctatcaaaattggtgaattatttcatatctaatgatacccaaaacga 8630 Query: 398 atcggaaataccgatggagcttttgaatcctcctttacattgttcgccgtttattgatac 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8631 atcggaaataccgatggagcttttgaatcctcctttacattgttcgccgtttattgatac 8690 Query: 458 gtggattgaccccgaacatcatacagcctttcattgggcatgtgcgatgggtacgttacc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8691 gtggattgaccccgaacatcatacagcctttcattgggcatgtgcgatgggtacgttacc 8750 Query: 518 cattgtagaggcactactaaaagcangaagttccatcagatcgttgaataacgtangaga 577 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||| Sbjct: 8751 cattgtagaggcactactaanagcaggaagttccatcagatcgttgaataacgtaggaga 8810 Query: 578 aacgccactaataagatcttcaatttttcacaattgttataccaaacggacgtatccgca 637 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8811 aacgccactaataagatcttcaatttttcacaattgttataccaaacggacgtatccgca 8870 Query: 638 gatctttgagattttga 654 ||||||||||||||||| Sbjct: 8871 gatctttgagattttga 8887 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7426 Number of Sequences: 1807 Number of extensions: 7426 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 993 length of database: 10,358,551 effective HSP length: 16 effective length of query: 977 effective length of database: 10,329,639 effective search space: 10092057303 effective search space used: 10092057303 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)