BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC2ZF10FM1.SCF screened BAC_end
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1627 1616 0.0
>3x_Contig1627
Length = 15708
Score = 1616 bits (815), Expect = 0.0
Identities = 894/909 (98%), Gaps = 10/909 (1%)
Strand = Plus / Plus
Query: 89 ttgtacgaaactgattaagtactcattttgaatcatttgggaaattgaatctaaagattt 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7125 ttgtacgaaactgattaagtactcattttgaatcatttgggaaattgaatctaaagattt 7184
Query: 149 cgtaactaattcagtttgtcccgaatttagagtccaaaccaagtaggattttataagaat 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7185 cgtaactaattcagtttgtcccgaatttagagtccaaaccaagtaggattttataagaat 7244
Query: 209 cgcgagatcttccaataccggggaaataatctgctgattactttcagtattttgagataa 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7245 cgcgagatcttccaataccggggaaataatctgctgattactttcagtattttgagataa 7304
Query: 269 tgtaatatccaaagaatcatttaagttcggcatgcatgaagttttcaaagaactcttgaa 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7305 tgtaatatccaaagaatcatttaagttcggcatgcatgaagttttcaaagaactcttgaa 7364
Query: 329 acagtatgtggtgtaatggatagtcaatgcatggaaagtgtcaatattgtcctgcaattt 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7365 acagtatgtggtgtaatggatagtcaatgcatggaaagtgtcaatattgtcctgcaattt 7424
Query: 389 tgaattgaacttaccgctggtaaggcatggtacaatcttgattggatctacggacccatt 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7425 tgaattgaacttaccgctggtaaggcatggtacaatcttgattggatctacggacccatt 7484
Query: 449 agtgaattgtaaccacttcatagagaaaaactggcagtacattgaccagttttgcaagaa 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7485 agtgaattgtaaccacttcatagagaaaaactggcagtacattgaccagttttgcaagaa 7544
Query: 509 attcgaaaattgtaagataatggcttgtaaagtcctcatgtcattattatcttgcaatga 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7545 attcgaaaattgtaagataatggcttgtaaagtcctcatgtcattattatcttgcaatga 7604
Query: 569 agcgaagactttatccaacgaaacatcatcagtgaaggtgtcccaaatcaaacaagcttg 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7605 agcgaagactttatccaacgaaacatcatcagtgaaggtgtcccaaatcaaacaagcttg 7664
Query: 629 tagatcagtctctaattgaactttttgcatgatctctaacatgaaatcagtggaatagct 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7665 tagatcagtctctaattgaactttttgcatgatctctaacatgaaatcagtggaatagct 7724
Query: 689 ttgcaaaataatcttggaatggtcgtttatcatcgtagaaacaattttgaaaaggtgtag 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7725 ttgcaaaataatcttggaatggtcgtttatcatcgtagaaacaattttgaaaaggtgtag 7784
Query: 749 tgtggattttgaataaaataatgggtccccggnagtatgtgtcattaacgtcctggattg 808
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7785 tgtggattttgaataaaataatgggtccccggaagtatgtgtcattaacgtcctggattg 7844
Query: 809 ttgtgcaatgttatcacatatatatttggagtaaagatctatttccagaatccg-agcac 867
||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 7845 ttgtgcaatgttatcacatatatatttggagtaaagatcta-ttccaagatccgaagcac 7903
Query: 868 caatttttggaaatagtttg-agcattcagtc-atgtgcc-acatccacgtctcttgtgg 924
|||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||
Sbjct: 7904 caatttttggaaatagtttgaagcattcagtcaatgtgccaacatccacgtctcttgtgg 7963
Query: 925 ct-ttgtaaacctatcag-aaatactttgcaaagatgagttt--cacttgtctat-agct 979
|| | ||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||
Sbjct: 7964 ctctggtaaacctatcagaaaatactttgcagagatgagttttccacttgtctataagct 8023
Query: 980 gaaccggtg 988
|||||||||
Sbjct: 8024 gaaccggtg 8032
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8018
Number of Sequences: 1807
Number of extensions: 8018
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)