BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC2ZG03FM1.SCF screened BAC_end
(995 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1739 765 0.0
>3x_Contig1739
Length = 22061
Score = 765 bits (386), Expect = 0.0
Identities = 395/397 (99%), Gaps = 1/397 (0%)
Strand = Plus / Plus
Query: 87 tacattggaaatattcaaatgtttttttctctggattttagttgtttttttttcgacctt 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9444 tacattggaaatattcaaatgtttttttctctggattttagttgtttttttttcgacctt 9503
Query: 147 tgacgattttctgtattttttcgaaaagttaatagtcaattttgtcttttactagtatga 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9504 tgacgattttctgtattttttcgaaaagttaatagtcaattttgtcttttactagtatga 9563
Query: 207 aatgccaattgtgtcacgtacagagctgacaattaaacttaaatcataattacaggtttt 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9564 aatgccaattgtgtcacgtacagagctgacaattaaacttaaatcataattacaggtttt 9623
Query: 267 agaatacatatgaaactccccgaatgttttttttattatattgacaaatgacacgacgaa 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9624 agaatacatatgaaactccccgaatgttttttttattatattgacaaatgacacgacgaa 9683
Query: 327 ggtccaattttttgctatgtaaaaattatatacatttttgatcgatgaagaaaaaaagtc 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9684 ggtccaattttttgctatgtaaaaattatatacatttttgatcgatgaagaaaaaaagtc 9743
Query: 387 tctagaagtggacgaatttctgggcaaagttctcatggccatcttcagcgctcttaccga 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9744 tctagaagtggacgaatttctgggcaaagttctcatggccatcttcagcgctcttaccga 9803
Query: 447 tcttaanatatttatcatttttttatgttttccttaa 483
|||||| |||||||||| |||||||||||||||||||
Sbjct: 9804 tcttaatatatttatca-ttttttatgttttccttaa 9839
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 30,556
Number of Sequences: 1807
Number of extensions: 30556
Number of successful extensions: 382
Number of sequences better than 1.0e-20: 1
length of query: 995
length of database: 10,358,551
effective HSP length: 16
effective length of query: 979
effective length of database: 10,329,639
effective search space: 10112716581
effective search space used: 10112716581
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)