BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZH06RM1.SCF screened BAC_end (1015 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1486 1683 0.0 >3x_Contig1486 Length = 12131 Score = 1683 bits (849), Expect = 0.0 Identities = 925/946 (97%), Gaps = 5/946 (0%) Strand = Plus / Plus Query: 44 tttgaagcagcatcagacataggatggataaagtatctacggagtcatcagagtgttcaa 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 tttgaagcagcatcagacataggatggataaagtatctacggagtcatcagagtgttcaa 80 Query: 104 tcagattacgttttgatgctgattgacatgaggaattcctggttattacctgtatcgttt 163 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 tcagattacgttttgatgctgattgacatgaggaattcctggttattacctgtatcgtta 140 Query: 164 tctttccactatgatgagtatgtttctgagagggaaagtttggattctaacgagacgaga 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 tctttccactatgatgagtatgtttctgagagggaaagtttggattctaacgagacgaga 200 Query: 224 agatttgtggtaccaattcgaaagatcgcaaactatgacgattctccaaattttaaggac 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 agatttgtggtaccaattcgaaagatcgcaaactatgacgattctccaaattttaaggac 260 Query: 284 aaacttatcccgagaattgatgaaagtaaacaatatctaacctctggactcactttaacc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 aaacttatcccgagaattgatgaaagtaaacaatatctaacctctggactcactttaacc 320 Query: 344 caagaaaatgagatgagagaaaagttctggtgcagagaacacatcctaaaccgcttaaag 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 caagaaaatgagatgagagaaaagttctggtgcagagaacacatcctaaaccgcttaaag 380 Query: 404 tgcacatgggatactgccttaaatgaacatactgaagggtctgttgaatttcgccagttt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 tgcacatgggatactgccttaaatgaacatactgaagggtctgttgaatttcgccagttt 440 Query: 464 gtagaaaaactcgataaacaagtgatctcactggtgtacccaccatcaaatgtgtttgat 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 gtagaaaaactcgataaacaagtgatctcactggtgtacccaccatcaaatgtgtttgat 500 Query: 524 atcaaagtaagtgcaagtgaaaccacagtaaaagtaggtacacctgtgcgtttgaacgta 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 atcaaagtaagtgcaagtgaaaccacagtaaaagtaggtacacctgtgcgtttgaacgta 560 Query: 584 actgtgaacacgacgttacatacagatcttgttcctatcagatactatatactggactat 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 actgtgaacacgacgttacatacagatcttgttcctatcagatactatatactggactat 620 Query: 644 ttcacaggtaaatctgtgcttagcgatcatccaaagtctatcgtattccagggccaaacg 703 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ttcacaggtaaatctgtgcttagcgatcatccaaagtctatcgtattccagggccaaacg 680 Query: 704 tcaacattagtgagaccgcggatcacgacagaattcaacatcttacctcntaaaaaagct 763 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 681 tcaacattagtgagaccgcggatcacgacagaattcaacatcttacctctaaaaaaagct 740 Query: 764 aagtttcanattgaaattgaagtgccgggaaacatcctgac-aggggaccaatcattat- 821 |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 741 aagtttcaaattgaaattgaagtgccgggaaacatcctgacaagggaaccaatcattata 800 Query: 822 acagcnagatgatgaagtgcagccac-gcactcattatgtggatcgatgtacatactggn 880 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 801 acagcaggatgatgaagtgcagccacggcactcattatgtggatcgatgtacatactgga 860 Query: 881 acagcatgaccccatc-acttgntnaattatatgttacccgcacagatgattgtcacgtn 939 ||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 861 acagcatga-cccatcaacttgttaaattatatgttacccgcacagatgattgtcacgtg 919 Query: 940 gataaaaatctctttcaacatgcgaatctgaaaatttttggttctc 985 ||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 920 attaaaattctctttcacaatgcgaatctgaaaatttttggttctc 965 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6938 Number of Sequences: 1807 Number of extensions: 6938 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 1015 length of database: 10,358,551 effective HSP length: 16 effective length of query: 999 effective length of database: 10,329,639 effective search space: 10319309361 effective search space used: 10319309361 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)