BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC2ZH08FM1.SCF screened BAC_end (1010 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1644 1287 0.0 >3x_Contig1644 Length = 13148 Score = 1287 bits (649), Expect = 0.0 Identities = 788/817 (96%), Gaps = 13/817 (1%) Strand = Plus / Plus Query: 86 aacctaccgagtggacattctattgaagggacaacgaagaaattatatcaatctttagat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3632 aacctaccgagtggacattctattgaagggacaacgaagaaattatatcaatctttagat 3691 Query: 146 gaggataaactcaggaaatcaatgagatgatcggccctttttagcgactctgaaaaacaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3692 gaggataaactcaggaaatcaatgagatgatcggccctttttagcgactctgaaaaacaa 3751 Query: 206 gaaacacgcctcacattctgttttcagatgagctgtagttcagtaatggcgtgatggata 265 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 3752 gaaacacgcctcacattctgtctccagatgagctgtagttcagtaatggcgtgatggata 3811 Query: 266 tcaaggtaccagccaccccgtacgtttcaaaaatcacaattttactaacaattttctatc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3812 tcaaggtaccagccaccccgtacgtttcaaaaatcacaattttactaacaattttctatc 3871 Query: 326 atttcgtgtgatattcttttaaacaggctaagaagtctttcatcatcaagcagaagttgg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3872 atttcgtgtgatattcttttaaacaggctaagaagtctttcatcatcaagcagaagttgg 3931 Query: 386 ctaaggccaagaaccaaaacagaccattgccacaatggtacagattgaagaccaacaaca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3932 ctaaggccaagaaccaaaacagaccattgccacaatggtacagattgaagaccaacaaca 3991 Query: 446 agatccgttacaacgctaagagaagacactggagaagaacaaagttgggtttgtaaactt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3992 agatccgttacaacgctaagagaagacactggagaagaacaaagttgggtttgtaaactt 4051 Query: 506 tttgtacatatcggaagaacgcacaacaatttttcttattatgtcaattttctctacagt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4052 tttgtacatatcggaagaacgcacaacaatttttcttattatgtcaattttctctacagt 4111 Query: 566 ttgcaaagtatactctacttatgtatagatagggtcagtttaataaattcaacatcgttt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4112 ttgcaaagtatactctacttatgtatagatagggtcagtttaataaattcaacatcgttt 4171 Query: 626 tacggtttttaattaaaactatgtattactcaaagatattatccttatgttaacctcttt 685 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4172 tacggtttttaattaaaactatgtattactcaaagatattatctttatgttaacctcttt 4231 Query: 686 tttaatctaaaaat-catactctgcca-gtattaccgaattgctttgcgtgggaatat-a 742 |||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||| | Sbjct: 4232 tttaatctaaaaattcatactctgccaagtattaccgaattgcttcgcgttggaatatca 4291 Query: 743 aca-ggtacggtatgcaaagataaa-ggatgaggctcc-tagataattccagttctggaa 799 ||| ||||||||||||||||||||| |||||||||| | |||||||||| |||| ||||| Sbjct: 4292 acaaggtacggtatgcaaagataaatggatgaggctacatagataattcaagttttggaa 4351 Query: 800 aa-tattcgaggtattaaaa-tgttcaa-tcccctaaa-tcactata-tttcagaaccta 854 || ||| |||||||||||| ||||||| | | ||||| ||| |||| ||||||| ||| Sbjct: 4352 aaatatcagaggtattaaaaatgttcaaatacactaaaatcattataatttcagatacta 4411 Query: 855 tctagct-aaagagggtt-gataactcatcatattat 889 ||||||| |||||| ||| |||||||||||||||||| Sbjct: 4412 tctagcttaaagagtgtttgataactcatcatattat 4448 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7381 Number of Sequences: 1807 Number of extensions: 7381 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 1010 length of database: 10,358,551 effective HSP length: 16 effective length of query: 994 effective length of database: 10,329,639 effective search space: 10267661166 effective search space used: 10267661166 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)