BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZA07FM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1665                                                         854   0.0  

>3x_Contig1665 
          Length = 15710

 Score =  854 bits (431), Expect = 0.0
 Identities = 451/455 (99%), Gaps = 2/455 (0%)
 Strand = Plus / Minus

                                                                        
Query: 84   ccatctgtggaacacgaaattgatgcataatgttgattatgaaattatgaagaagggtgt 143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8688 ccatctgtggaacacgaaattgatgcataatgttgattatgaaattatgaagaagggtgt 8629

                                                                        
Query: 144  atttagcgatgatgttatagaggatgaattggactttcaggacgtcttagatgagaatga 203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8628 atttagcgatgatgttatagaggatgaattggactttcaggacgtcttagatgagaatga 8569

                                                                        
Query: 204  ccttctggacgttttaaaggttgatgatttggatcaagatatggaacttgccatggatat 263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8568 ccttctggacgttttaaaggttgatgatttggatcaagatatggaacttgccatggatat 8509

                                                                        
Query: 264  tagtaatgaggatgcgttgagcgtagatgaggaaggg-gatattatgggagaagaggagg 322
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 8508 tagtaatgaggatgcgttgagcgtagatgaggaagggagatattatgggagaagaggagg 8449

                                                                        
Query: 323  aagcagcactcatagaagatcctgaaatattcgacaccatcggtgccgtatatggacttg 382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8448 aagcagcactcatagaagatcctgaaatattcgacaccatcggtgccgtatatggacttg 8389

                                                                        
Query: 383  ataccgtttcgttatcttcaaatgcctccgtatcttcttcctcatcttctacttcgtcat 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8388 ataccgtttcgttatcttcaaatgcctccgtatcttcttcctcatcttctacttcgtcat 8329

                                                                        
Query: 443  cgatttcagaaacaccttcgatatcatctctgtattctgttgaaaagggtattggatgaa 502
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8328 cgatttcagaaacaccttcgatatcatctctgtattctgttgaaaagggta-tggatgaa 8270

                                               
Query: 503  aacctagccttgttgaacgagttttatatttacaa 537
            |||||||||| ||||||||||||| ||||||||||
Sbjct: 8269 aacctagcctcgttgaacgagtttcatatttacaa 8235


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8345
Number of Sequences: 1807
Number of extensions: 8345
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)