BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZB03RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1369 1112 0.0 >3x_Contig1369 Length = 7461 Score = 1112 bits (561), Expect = 0.0 Identities = 586/595 (98%) Strand = Plus / Minus Query: 44 gcttctgctgcggtacattattctgttgttgttgttgttgttgttgttgttgtactggag 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5232 gcttctgctgcggtacattattctgttgttgttgttgttgttgttgttgttgtactggag 5173 Query: 104 gttgcatctgctggccagcattatgagcttgtaaatcggcactcaacgccagtagaatgg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5172 gttgcatctgctggccagcattatgagcttgtaaatcggcactcaacgccagtagaatgg 5113 Query: 164 atttgaaatccagtaaattggtcaaagaccgatcaatgaccatcataatctttgttggta 223 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 5112 atttgaaatccagtaaattggtcaaagaccgatcaatgaccatcataatctctggtggta 5053 Query: 224 cgaccatgtggttagccatcatcttaagagattggatctgtgccttcaacaagagcgact 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5052 cgaccatgtggttagccatcatcttaagagattggatctgtgccttcaacaagagcgact 4993 Query: 284 gttcatctgtgaacaaagaccgtgatgatgacgcgttattattattattattattattag 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4992 gttcatctgtgaacaaagaccgtgatgatgacgcgttattattattattattattattag 4933 Query: 344 aattagaattagaattagaattggtgctagctggcgtattcactcctactgttagaccag 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4932 aattagaattagaattagaattggtgctagctggcgtattcactcctactgttagaccag 4873 Query: 404 aagccggcgcgatcggctgaggtcctacctgtggtgacatatgtggtggtggtaccgctg 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4872 aagccggcgcgatcggctgaggtcctacctgtggtgacatatgtggtggtggtaccgctg 4813 Query: 464 ttgctgctacagggcccataccattactgccaggggtataagcagacggagtcggtatgt 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4812 ttgctgctacagggcccataccattactgccaggggtataagcagacggagtcggtatgt 4753 Query: 524 tattcggcgaagccgaactagctgctgctgctgttgttgcattctgcaattgctgctgct 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4752 tattcggcgaagccgaactagctgctgctgctgttgttgcattctgcaattgctgctgct 4693 Query: 584 gctgttgntgttgntgtggttggtggcgctgctgctgttgtttggtagccatcct 638 ||||||| ||||| ||| |||| || ||||||||||||||| ||| ||||||||| Sbjct: 4692 gctgttgttgttgttgttgttgttgtcgctgctgctgttgtctggcagccatcct 4638 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,232 Number of Sequences: 1807 Number of extensions: 11232 Number of successful extensions: 1364 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)