BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZB06RM1.SCF screened BAC_end (923 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1739 1279 0.0 >3x_Contig1739 Length = 22061 Score = 1279 bits (645), Expect = 0.0 Identities = 718/737 (97%), Gaps = 4/737 (0%) Strand = Plus / Plus Query: 47 ctaatcgctgctaattttaattctgtcaaatgtccttgacatggatttaaatccacccca 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2753 ctaatcgctgctaattttaattctgtcaaatgtccttgacatggatttaaatccacccca 2812 Query: 107 tgaattctcttcggtggattaggcaaagtggcatagtgcaaaatattatcaccagcactg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2813 tgaattctcttcggtggattaggcaaagtggcatagtgcaaaatattatcaccagcactg 2872 Query: 167 gtaatagccaaaatggtatcttctggttgaatattaagaatgttaacatcttctctagga 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2873 gtaatagccaaaatggtatcttctggttgaatattaagaatgttaacatcttctctagga 2932 Query: 227 tcttcccatgtgaatgcgtatatataactgttcttaaattggctgtactcagggttcact 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2933 tcttcccatgtgaatgcgtatatataactgttcttaaattggctgtactcagggttcact 2992 Query: 287 tcatcatagtacactctccaatgctccttttgatagaacagagaaggatatggtaaacct 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2993 tcatcatagtacactctccaatgctccttttgatagaacagagaaggatatggtaaacct 3052 Query: 347 tttttagaattttctagtgctgcaatcatagctttggtcattggctgagcgttagaggaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3053 tttttagaattttctagtgctgcaatcatagctttggtcattggctgagcgttagaggaa 3112 Query: 407 gctgacgtggttataggtgcgaggtatggagatgttggtgcaagttcaacaaatctagct 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3113 gctgacgtggttataggtgcgaggtatggagatgttggtgcaagttcaacaaatctagct 3172 Query: 467 tgaagatgttgttcgtggtctttattgcaacccaaccaaatgtagtagggaattttacca 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3173 tgaagatgttgttcgtggtctttattgcaacccaaccaaatgtagtagggaattttacca 3232 Query: 527 agcttgtagttataacaattcaatgattttgattgtcccgaatctatattcaagatattc 586 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3233 agcttgtagttataacaattcaatga-tttgattgtcccgaatctatattcaagatattc 3291 Query: 587 tcttctagctggat-caaaaacactttgtcgaattc-aaccacaatctccagaatgtacg 644 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 3292 tcttctagctggatccaaaaacactttgtcgaattcaaaccacaatctccagaatgtacg 3351 Query: 645 gaatagccaaagtatatgtctgttaactagaccacccaagttgttggtttctttcgactt 704 |||||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 3352 gaatagccaaggtatatgtctgttaactagaccacccaaagtgttgg-ttcttccgacta 3410 Query: 705 gcctagattcattagggacaccaaaattaccccaccaaatgatccccttcttagcatccc 764 || |||||||||||| ||||||||||| | | ||| ||||||| || |||||||||||| Sbjct: 3411 gcatagattcattagtgacaccaaaatcaacacacgaaatgataccattcttagcatcca 3470 Query: 765 attaagatactgcgtga 781 || |||||||||||||| Sbjct: 3471 ataaagatactgcgtga 3487 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,134 Number of Sequences: 1807 Number of extensions: 12134 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 923 length of database: 10,358,551 effective HSP length: 16 effective length of query: 907 effective length of database: 10,329,639 effective search space: 9368982573 effective search space used: 9368982573 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)