BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZB08RM1.SCF screened BAC_end
         (944 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1494                                                        1356   0.0  

>3x_Contig1494 
          Length = 10561

 Score = 1356 bits (684), Expect = 0.0
 Identities = 743/760 (97%), Gaps = 2/760 (0%)
 Strand = Plus / Plus

                                                                        
Query: 43   gctttgatcaatataccagaacttttggcccatgaaaatatttatcagatccaggtggga 102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8856 gctttgatcaatataccagaacttttggcccatgaaaatatttatcagatccaggtggga 8915

                                                                        
Query: 103  tcgaaattgtttaaagttagtggtgcatcgctaagcagcgatggtccctcttttttcact 162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8916 tcgaaattgtttaaagttagtggtgcatcgctaagcagcgatggtccctcttttttcact 8975

                                                                        
Query: 163  gactatttcaattctcaagagaatgcagatgcatctcacgttttgaccatcgatagatcg 222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8976 gactatttcaattctcaagagaatgcagatgcatctcacgttttgaccatcgatagatcg 9035

                                                                        
Query: 223  gatgttgttttcgagactattatggcccatttacaaggatatcctctatcaatattggat 282
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9036 gatgttgttttcgagactattatggcccatttacaaggatatcctctatcaatattggat 9095

                                                                        
Query: 283  gagaaagaattcattaccttatttttggattcgttgtactatagattacctaggttaaag 342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9096 gagaaagaattcattaccttatttttggattcgttgtactatagattacctaggttaaag 9155

                                                                        
Query: 343  agaatgttgcaaaaatacgactattatttcattaacatcggcggtaagcatttcaaattc 402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9156 agaatgttgcaaaaatacgactattatttcattaacatcggcggtaagcatttcaaattc 9215

                                                                        
Query: 403  tcaaaaagtgtcttcgatagacccggagactcccctaattattttaatcttttgatcgac 462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9216 tcaaaaagtgtcttcgatagacccggagactcccctaattattttaatcttttgatcgac 9275

                                                                        
Query: 463  tcgatgttggtcgatgtggagaacttgttccacgataaaaaaatgatcagacccccatct 522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9276 tcgatgttggtcgatgtggagaacttgttccacgataaaaaaatgatcagacccccatct 9335

                                                                        
Query: 523  catttcatcccattcgttactagatccagtgaattgtttcaagaaatcctaaatctctta 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9336 catttcatcccattcgttactagatccagtgaattgtttcaagaaatcctaaatctctta 9395

                                                                        
Query: 583  acggatgacgactacgttgtacctggtcatatctctatcaataatcttttaagagagtgt 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9396 acggatgacgactacgttgtacctggtcatatctctatcaataatcttttaagagagtgt 9455

                                                                        
Query: 643  gagttttactgcttgcttaatttacaacagagactccttcctcataagatcacctagtat 702
             ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 9456 aagttttactgcttgcttaatttacaacagagactccttcctcataagatca-ctagtaa 9514

                                                                        
Query: 703  tccattttggcaaagagaggagattcctttgtaaattccgcatcttagaagaacggggat 762
            |||||||||  |||||||||||||  || || || | | |||||| ||||||||||||||
Sbjct: 9515 tccattttgcaaaagagaggagatcactatgaaattacagcatctcagaagaacggggat 9574

                                                    
Query: 763  gaaacttttgatgcaaaggtgaagacttatatgaatgtat 802
            |||||| |||||||||| |||||||| || ||||||||||
Sbjct: 9575 gaaactattgatgcaaa-gtgaagacataaatgaatgtat 9613


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7386
Number of Sequences: 1807
Number of extensions: 7386
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 944
length of database: 10,358,551
effective HSP length: 16
effective length of query: 928
effective length of database: 10,329,639
effective search space: 9585904992
effective search space used: 9585904992
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)