BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZB09RM1.SCF screened BAC_end
         (920 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1582                                                        1366   0.0  

>3x_Contig1582 
          Length = 14087

 Score = 1366 bits (689), Expect = 0.0
 Identities = 733/744 (98%), Gaps = 3/744 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    taaatctcaacattatgcatatgaacaatgtcaactgatttaaacgattttggggaacag 107
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 11726 taaatctcaacattatgcaaatgaacaatgtcaactgatttaaacgattttggggaacag 11785

                                                                         
Query: 108   ccagcgtattgtcatttgtagctgctgctgtgtccataaccataggtcagaagttcttat 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11786 ccagcgtattgtcatttgtagctgctgctgtgtccataaccataggtcagaagttcttat 11845

                                                                         
Query: 168   agtactggaatactgcaccacaaagatagattattcatttagaaatgtcagagggcgttg 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11846 agtactggaatactgcaccacaaagatagattattcatttagaaatgtcagagggcgttg 11905

                                                                         
Query: 228   gaaagcataatcaaagattaccaatttgggtattgaaccctaccgaggagaaagaagctc 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11906 gaaagcataatcaaagattaccaatttgggtattgaaccctaccgaggagaaagaagctc 11965

                                                                         
Query: 288   gtcagaatttgaagaaatttgcatatgcacaatgtgtagaatacgtggaggccatggtcg 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11966 gtcagaatttgaagaaatttgcatatgcacaatgtgtagaatacgtggaggccatggtcg 12025

                                                                         
Query: 348   aatgttcaaagattcatggattgaagcttttcccagcgtgtaacgaacctcgtgacgcta 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12026 aatgttcaaagattcatggattgaagcttttcccagcgtgtaacgaacctcgtgacgcta 12085

                                                                         
Query: 408   tgcgcaaatgtatattatcataccagaaggattctaatctggatcgtcaacgtgacttga 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12086 tgcgcaaatgtatattatcataccagaaggattctaatctggatcgtcaacgtgacttga 12145

                                                                         
Query: 468   tagtggaacgtaagattgagagacttgaggatcttctcaagaaacaaaaggaataaagtt 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12146 tagtggaacgtaagattgagagacttgaggatcttctcaagaaacaaaaggaataaagtt 12205

                                                                         
Query: 528   gacatgatatgacatgacatgacatgccactggggttacttgtatatagtagtagatact 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12206 gacatgatatgacatgacatgacatgccactggggttacttgtatatagtagtagatact 12265

                                                                         
Query: 588   gcaccataatanattaacattttagaaaggcacatccatgattgaagtttatctgcttca 647
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12266 gcaccataataaattaacattttagaaaggcacatccatgattgaagtttatctgcttca 12325

                                                                         
Query: 648   ttgtttcccattattattatagtttgtacagggtgttcaaaagagtaaactagtttacat 707
             |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12326 ttgtttcccattataattatagtttgtaca-ggtgttcaaaagagtaaactagtttacat 12384

                                                                         
Query: 708   taagtctagaagatcggttgcatgggaattcgaggtggtggttgttgttaatattgggtt 767
             |||||||||||||||||||||||||||||||||||| || |||||||||| |||||| ||
Sbjct: 12385 taagtctagaagatcggttgcatgggaattcgaggt-gttgttgttgttattattggttt 12443

                                     
Query: 768   tctgtggaaagttttactttcccc 791
             ||||| ||||  ||||||||||||
Sbjct: 12444 tctgt-gaaatgtttactttcccc 12466


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7199
Number of Sequences: 1807
Number of extensions: 7199
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)