BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZB09RM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1582 1366 0.0 >3x_Contig1582 Length = 14087 Score = 1366 bits (689), Expect = 0.0 Identities = 733/744 (98%), Gaps = 3/744 (0%) Strand = Plus / Plus Query: 48 taaatctcaacattatgcatatgaacaatgtcaactgatttaaacgattttggggaacag 107 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 11726 taaatctcaacattatgcaaatgaacaatgtcaactgatttaaacgattttggggaacag 11785 Query: 108 ccagcgtattgtcatttgtagctgctgctgtgtccataaccataggtcagaagttcttat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11786 ccagcgtattgtcatttgtagctgctgctgtgtccataaccataggtcagaagttcttat 11845 Query: 168 agtactggaatactgcaccacaaagatagattattcatttagaaatgtcagagggcgttg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11846 agtactggaatactgcaccacaaagatagattattcatttagaaatgtcagagggcgttg 11905 Query: 228 gaaagcataatcaaagattaccaatttgggtattgaaccctaccgaggagaaagaagctc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11906 gaaagcataatcaaagattaccaatttgggtattgaaccctaccgaggagaaagaagctc 11965 Query: 288 gtcagaatttgaagaaatttgcatatgcacaatgtgtagaatacgtggaggccatggtcg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11966 gtcagaatttgaagaaatttgcatatgcacaatgtgtagaatacgtggaggccatggtcg 12025 Query: 348 aatgttcaaagattcatggattgaagcttttcccagcgtgtaacgaacctcgtgacgcta 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12026 aatgttcaaagattcatggattgaagcttttcccagcgtgtaacgaacctcgtgacgcta 12085 Query: 408 tgcgcaaatgtatattatcataccagaaggattctaatctggatcgtcaacgtgacttga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12086 tgcgcaaatgtatattatcataccagaaggattctaatctggatcgtcaacgtgacttga 12145 Query: 468 tagtggaacgtaagattgagagacttgaggatcttctcaagaaacaaaaggaataaagtt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12146 tagtggaacgtaagattgagagacttgaggatcttctcaagaaacaaaaggaataaagtt 12205 Query: 528 gacatgatatgacatgacatgacatgccactggggttacttgtatatagtagtagatact 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12206 gacatgatatgacatgacatgacatgccactggggttacttgtatatagtagtagatact 12265 Query: 588 gcaccataatanattaacattttagaaaggcacatccatgattgaagtttatctgcttca 647 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12266 gcaccataataaattaacattttagaaaggcacatccatgattgaagtttatctgcttca 12325 Query: 648 ttgtttcccattattattatagtttgtacagggtgttcaaaagagtaaactagtttacat 707 |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12326 ttgtttcccattataattatagtttgtaca-ggtgttcaaaagagtaaactagtttacat 12384 Query: 708 taagtctagaagatcggttgcatgggaattcgaggtggtggttgttgttaatattgggtt 767 |||||||||||||||||||||||||||||||||||| || |||||||||| |||||| || Sbjct: 12385 taagtctagaagatcggttgcatgggaattcgaggt-gttgttgttgttattattggttt 12443 Query: 768 tctgtggaaagttttactttcccc 791 ||||| |||| |||||||||||| Sbjct: 12444 tctgt-gaaatgtttactttcccc 12466 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7199 Number of Sequences: 1807 Number of extensions: 7199 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)