BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZB12FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1799 1235 0.0 >3x_Contig1799 Length = 39855 Score = 1235 bits (623), Expect = 0.0 Identities = 687/707 (97%), Gaps = 1/707 (0%) Strand = Plus / Plus Query: 86 agtaacgcgcttcttatgatgattaaaatccttttttcagacgttagacttctgattttt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1026 agtaacgcgcttcttatgatgattaaaatccttttttcagacgttagacttctgattttt 1085 Query: 146 aaaggaagaaacaaggtatagatatctgaagagtgtgttccaattaatataatttctcgt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1086 aaaggaagaaacaaggtatagatatctgaagagtgtgttccaattaatataatttctcgt 1145 Query: 206 agtagtatttatttttccaatagttgtagaatcgtagaatacctgatctgttgtcgcatg 265 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1146 agtagtatttatagcaccaatagttgtagaatcgtagaatacctgatctgttgtcgcatg 1205 Query: 266 cgtagcacgtaatctgtttttcttcctagtagttgtctccgactcttgtcacattgcaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1206 cgtagcacgtaatctgtttttcttcctagtagttgtctccgactcttgtcacattgcaaa 1265 Query: 326 agttaacatttaaagattaattgaatcttttaattattgcatttaacaaaaccatactgt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1266 agttaacatttaaagattaattgaatcttttaattattgcatttaacaaaaccatactgt 1325 Query: 386 aaaagaacgaaacacacgcctaagctacgcgaatcacttcgggccccattagctgaaatt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 aaaagaacgaaacacacgcctaagctacgcgaatcacttcgggccccattagctgaaatt 1385 Query: 446 tctatctcactaacggcggtgaaacgaatcatgactttcaagaaactggtatcgtttgaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1386 tctatctcactaacggcggtgaaacgaatcatgactttcaagaaactggtatcgtttgaa 1445 Query: 506 gtcgagtatgcacctcagtatcatttcactaagtacatctcaactcgtaccaagcttcaa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1446 gtcgagtatgcacctcagtatcatttcactaagtacatctcaactcgtaccaagcttcaa 1505 Query: 566 ctagttcacttaaataacaagtcgtcacctttagtacaaggttactttgccgttggaaca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1506 ctagttcacttaaataacaagtcgtcacctttagtacaaggttactttgccgttggaaca 1565 Query: 626 gtatgtccaacagattctggtgttccttacaccttagagcacttgattttattgggatct 685 | ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 1566 gaatgtccaacagattctggtgttcctcacaccttagagcacttgattttcatgggatct 1625 Query: 686 gagaaagtcccatacaaagggttgctcgattctgctggaaaactatgcatgtcaaattac 745 ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 1626 gagaagtacccatacaaagggttgctcgatactgctggaaacctatgcatgtcaaataca 1685 Query: 746 aatgcttggattgccaccgatcaaaaccgtttatattttgtcaaccg 792 |||||||||| ||||||||||| |||||||||| | ||||||||||| Sbjct: 1686 aatgcttggactgccaccgatc-aaaccgtttacactttgtcaaccg 1731 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6874 Number of Sequences: 1807 Number of extensions: 6874 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)