BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZB12RM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1643 1178 0.0 >3x_Contig1643 Length = 10865 Score = 1178 bits (594), Expect = 0.0 Identities = 672/694 (96%), Gaps = 3/694 (0%) Strand = Plus / Plus Query: 51 agcttgaatagcacaccggacttgtttcaagcctttaatttaatcaacagagcagtactt 110 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2091 agcttgaatagcaaaccggacttgaatcaagcctttaatttaatcaacagagcagtactt 2150 Query: 111 tatactctttcgtttgcgtctaccgaactggaatcaatgttctttgaaagcatttcggtg 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2151 tatactctttcgtttgcgtctaccgaactggaatcaatgttctttgaaagcatttcggtg 2210 Query: 171 cgtggtagcttctttttttt-aatatttttcacactaagcagcttttactatgttatgat 229 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2211 cgtggtagcttcttttttttcaatatttttcacactaagcagcttttactatgggatgat 2270 Query: 230 gaatatcaacaaattctgaatatttttatctatagatatcgatcttgacattaagagtca 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2271 gaatatcaacaaattctgaatatttttatctatagatatcgatcttgacattaagagtca 2330 Query: 290 tactgaatatgttaatgaaactgaaacttgtataaaaacaacccattggtttcataactt 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2331 tactgaatatgttaatgaaactgaaacttgtataaaaacaacccattggtttcataactt 2390 Query: 350 tttttgtttccattaaacagattgagcatcggttagaaattgtgcttctggaaaaagcca 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2391 tttttgtttccattaaacagattgagcatcggttagaaattgtgcttctggaaaaagcca 2450 Query: 410 tttgtggagtaactctataacggaaaaccacgcatattatttaacgatgaatgtcacttt 469 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2451 tttgtggagtaactctataacggaaaaccacgcatattatttaacgatgaaggtcacttt 2510 Query: 470 ttcgcttatgcagaaggcatcaaaacagatagataagttcgcattgtacgttcccaaaag 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2511 ttcgcttatgcagaaggcatcaaaacagatagataagttcgcattgtacgttcccaaaag 2570 Query: 530 cggcgtgtttgctaagggatttaaagtagccactcaagctactggtgtcaagaaaaatgg 589 |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2571 cggcgtgtttcctaagggattcaaagtagccactcaagctactggtgtcaagaaaaatgg 2630 Query: 590 caatttagatctaggtatcatttagaatgttaatacatctcgtacatcgagtgctgctgc 649 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 2631 caatttagatctaggtatcattagaaatgttaatacatctcgtccatcgagtgctgctgc 2690 Query: 650 tgtgtttactacagataaattcaaggctgcttcagtttctgtttttaaagaagtattgga 709 ||||||||||||| ||||||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 2691 tgtgtttactacaaataaattcaaggctgctccagttcttgtatctaaagaagtattgga 2750 Query: 710 agttactgtgcggtgaagaatgttgatgctattg 743 |||||||| | |||| |||||||||||||||||| Sbjct: 2751 agttactg-gtggtg-agaatgttgatgctattg 2782 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9138 Number of Sequences: 1807 Number of extensions: 9138 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)