BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZC11FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1214 1253 0.0 >3x_Contig1214 Length = 6334 Score = 1253 bits (632), Expect = 0.0 Identities = 736/763 (96%), Gaps = 7/763 (0%) Strand = Plus / Minus Query: 85 cgccatcaatatcttcggcgatgatcaacaatggtcttctggtttggtttgacaattcca 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5267 cgccatcaatatcttcggcgatgatcaacaatggtcttctggtttggtttgacaattcca 5208 Query: 145 aagaaggcaagatatcctggattgaggagatcttcttttcactcaataagatcaaaggtt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5207 aagaaggcaagatatcctggattgaggagatcttcttttcactcaataagatcaaaggtt 5148 Query: 205 tttcaaattccactttaccagatttagcgtcggtaataaagtatggagaaatgaaaccac 264 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5147 tttcaaattccaccttaccagatttagcgtcggtaataaagtatggagaaatgaaaccac 5088 Query: 265 ggtcgaatctcataccttcagtgacttccaattcatcttccaaggttctaccctctctga 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5087 ggtcgaatctcataccttcagtgacttccaattcatcttccaaggttctaccctctctga 5028 Query: 325 tagtgatgacaccttccttaccaactttttccatggctgaagccaacaacttaccaacgt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5027 tagtgatgacaccttccttaccaactttttccatggctgaagccaacaacttaccaacgt 4968 Query: 385 gagcatccccgttggcagaaatagttgccacttgagcgatttcagcagaagtggtgattt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4967 gagcatccccgttggcagaaatagttgccacttgagcgatttcagcagaagtggtgattt 4908 Query: 445 ctttcttgttctctgacaagtattgaattactttttcgacagcagcttgagtacctcttc 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4907 ctttcttgttctctgacaagtattgaattactttttcgacagcagcttgagtacctcttc 4848 Query: 505 tcaaatccattgggttacaaccagctgcaacattcttaacggattcagtgaaaatggcct 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4847 tcaaatccattgggttacaaccagctgcaacattcttaacggattcagtgaaaatggcct 4788 Query: 565 tacctaagacagtggcagaagtggtaccgtcaccggcagcttcgtttgtcttggaatgca 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4787 tacctaagacagtggcagaagtggtaccgtcaccggcagcttcgtttgtcttggaagcaa 4728 Query: 625 cttcttgtaaaagcttagcacccatgttttcgaacttatcttccaaagtaatggctctag 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4727 cttcttgtaaaagcttagcacccatgttttcgaacttatcttccaaagtaatggctctag 4668 Query: 685 caacagtaacaccatccttggtgatcttttggagcggaaaattggttgctcattccaaac 744 |||||||||||||||||||||||||| ||||||||| ||| |||||||||| || |||| Sbjct: 4667 caacagtaacaccatccttggtgatc-tttggagcgccaaa-tggttgctcaatcaaaac 4610 Query: 745 gttttttcccttttgggccccaaagtggccaaaaccactttccgctagagtttcaaacac 804 |||| | || ||| || |||||||||| || || || ||||||||||||||| ||||| Sbjct: 4609 gtttctacc--ttttggacccaaagtgg-cagaaacagcttccgctagagtttc-aacac 4554 Query: 805 ccttttacaaggcgagttttaccttaaacaccaaactttaatt 847 ||||| ||||||| || | |||||| ||||||||||||||||| Sbjct: 4553 cctttaacaaggc-agctctaccttcaacaccaaactttaatt 4512 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7073 Number of Sequences: 1807 Number of extensions: 7073 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)