BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZD07RM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1774 1225 0.0 >3x_Contig1774 Length = 27771 Score = 1225 bits (618), Expect = 0.0 Identities = 663/673 (98%), Gaps = 4/673 (0%) Strand = Plus / Plus Query: 47 ttttttaattcattttcactgagaagctgctttggggcaggtactaattttcatcattta 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6615 ttttttaattcattttcactgagaagctgctttggggcaggtactaattttcatcattta 6674 Query: 107 aaaaaaaaaaaaaaaaggtttataatagcatccaacatgtattcaaatgcaaaacatcgg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6675 aaaaaaaaaaaaaaaaggtttataatagcatccaacatgtattcaaatgcaaaacatcgg 6734 Query: 167 tcaaaaatgtaaaccacaaggaaaacacaggcactagaggctacaaaactggtgtataac 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6735 tcaaaaatgtaaaccacaaggaaaacacaggcactagaggctacaaaactggtgtataac 6794 Query: 227 tatccgtcatcagttatatttgtgatacataccatggaaaacccgtatgagaaagttcaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6795 tatccgtcatcagttatatttgtgatacataccatggaaaacccgtatgagaaagttcaa 6854 Query: 287 agcaatattctggctagaatcattggcaatgtcgaaaggttgaaccagagtgtagtgata 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6855 agcaatattctggctagaatcattggcaatgtcgaaaggttgaaccagagtgtagtgata 6914 Query: 347 ctaaaccaagagcttcgaagggtaaacaccaagaataagaatttggaactgatgtcacaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6915 ctaaaccaagagcttcgaagggtaaacaccaagaataagaatttggaactgatgtcacaa 6974 Query: 407 atgtgtgagaactatagagaatctgttgatttccagttgcaggcaacttccaagaaacag 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6975 atgtgtgagaactatagagaatctgttgatttccagttgcaggcaacttccaagaaacag 7034 Query: 467 gacccattgtaaggtctcacatatattctaacgagaagaatttattaaaaaaaaaaagca 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7035 gacccattgtaaggtctcacatatattctaacgagaagaatttattaaaaaaaaaaagca 7094 Query: 527 gttacttaagtgatgtagtatgtacgtatatacatacgccttnttatagtcggtttcagg 586 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 7095 gttacttaagtgatgtagtatgtacgtatatacatacgcctttttatagtcggtttcagg 7154 Query: 587 accgtactgattct-atttacagat-ataatggattaattttttttgttcatgttcagtg 644 |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 7155 accgtactgattctaatttacagataataatggattaattttttttgttcatgttcagtg 7214 Query: 645 agttttaaccggtgcaattttgtctgcgaattg-ggtccaacttgttaggacctttattt 703 |||||||||||||||||||||||||||| |||| | |||||||||| ||||| ||| || Sbjct: 7215 agttttaaccggtgcaattttgtctgcggattgtgttccaacttgtagggacc-ttagtt 7273 Query: 704 tggcaaaaggttg 716 ||||||||||||| Sbjct: 7274 tggcaaaaggttg 7286 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 27,217 Number of Sequences: 1807 Number of extensions: 27217 Number of successful extensions: 2950 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)