BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZE03FM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1641 1374 0.0 >3x_Contig1641 Length = 13261 Score = 1374 bits (693), Expect = 0.0 Identities = 769/785 (97%), Gaps = 7/785 (0%) Strand = Plus / Minus Query: 86 tgtagtgaatttgcaactgaaaatggaccaaagatgatgtacaccatcggggtgcatccg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10156 tgtagtgaatttgcaactgaaaatggaccaaagatgatgtacaccatcggggtgcatccg 10097 Query: 146 tgtcaggttaacgaattcatgcccaaacactcaaaatcgtaccggaaatcagattcaagc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10096 tgtcaggttaacgaattcatgcccaaacactcaaaatcgtaccggaaatcagattcaagc 10037 Query: 206 gaggatcttccgtttgcaattgaaaaccatcagtttaccaaagctagattgcacgaattg 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10036 gaggatcttccgtttgcaattgaaaaccatcagtttaccaaagctagattgcacgaattg 9977 Query: 266 tatgatttgtggaaactccaagcaatgaccgataacgagcatttcagggccattggtgaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9976 tatgatttgtggaaactccaagcaatgaccgataacgagcatttcagggccattggtgaa 9917 Query: 326 attgggttggattatgatagattccatttctcgggactggaaatccaaaagttcttcttc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9916 attgggttggattatgatagattccatttctcgggactggaaatccaaaagttcttcttc 9857 Query: 386 ctggaacaattgaagttaagttgcttcttccctgataaaccgttgttcttacacatgaga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9856 ctggaacaattgaagttaagttgcttcttccctgataaaccgttgttcttacacatgaga 9797 Query: 446 agctgtgctgatgatttcttgcacatcttgaaattattcatcaatggtttcaacgatgat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9796 agctgtgctgatgatttcttgcacatcttgaaattattcatcaatggtttcaacgatgat 9737 Query: 506 aaggatttatttggctataaatcgtggatcgatccaagcgtaccagattcaccaatattg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9736 aaggatttatttggctataaatcgtggatcgatccaagcgtaccagattcaccaatattg 9677 Query: 566 aatacagacggctctgtaacttataagttcagtgctgcgaggaaatttgtcgttcactct 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9676 aatacagacggctctgtaacttataagttcagtgctgcgaggaaatttgtcgttcactct 9617 Query: 626 ttcacaggatcagtacaagatatggaaatattactggattgctcccaaaa-tgctatttc 684 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9616 ttcacaggatcagtacaagatatggaaatattactggattgctcccaaaattgctatttc 9557 Query: 685 agcgtcaacggctgttcaatgagattctga-gagagcattgaaatgattaaatcacttcc 743 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 9556 agcgtcaacggctgttcaatgaga-tctgaggagagcattgaaatgattaaatcacttcc 9498 Query: 744 tgttgataaattactactggaaacaga-gcaccatggtgcgacctgagaaagacccatgg 802 ||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| ||| | Sbjct: 9497 tgttgataaattactactggaaacagacgcaccatggtgcgacgtgagaaggacacat-g 9439 Query: 803 cttattaca-aattttgattcaagattcagattccaaaatcgaaaattgttgggaatcat 861 ||| |||| | |||||| ||||||| ||||| ||||||||||||||||||||| ||||| Sbjct: 9438 cttcatacagatttttgaatcaagatgcagatcccaaaatcgaaaattgttggg-atcat 9380 Query: 862 ggatt 866 ||||| Sbjct: 9379 ggatt 9375 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6927 Number of Sequences: 1807 Number of extensions: 6927 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)