BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZE04FM1.SCF screened BAC_end (1153 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1584 295 1e-79 >3x_Contig1584 Length = 9710 Score = 295 bits (149), Expect = 1e-79 Identities = 194/209 (92%) Strand = Plus / Plus Query: 121 aacccaactatatctccggctgctccaatgtccccgttgacaaaactggatgattctcag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3130 aacccaactatatctccggctgctccaatgtccccgttgacaaaactggatgattctcag 3189 Query: 181 gcaagaggtaatgcggactccaagtcagtatgtcctaacggtggtattgtaaacagcaat 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3190 gcaagaggtaatgcggactccaagtcagtaggtcctaacggtggtattgtaaacagcaat 3249 Query: 241 gccatttttttgtccaaatctaatacacatgattttcaggcctcaggtgatacggaactg 300 |||| |||||||||| |||||||| || | |||||||||| |||||||||||||| Sbjct: 3250 gccacaagcatgtccaaatcaaatacacaagaatctcaggcctcaagtgatacggaactg 3309 Query: 301 ccacgtatcggtaccatggccagcatgat 329 |||||||||||||||| ||||| ||||| Sbjct: 3310 tcacgtatcggtaccattgccagtatgat 3338 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7926 Number of Sequences: 1807 Number of extensions: 7926 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 1153 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1137 effective length of database: 10,329,639 effective search space: 11744799543 effective search space used: 11744799543 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)