BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZE05RM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1320 1461 0.0 >3x_Contig1320 Length = 7350 Score = 1461 bits (737), Expect = 0.0 Identities = 803/816 (98%), Gaps = 7/816 (0%) Strand = Plus / Minus Query: 40 acattacctcatctctctattttttgagcccatgctttgggtacttgaccggtaaattcc 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1629 acattacctcatctctctattttttgagcccatgctttgggtacttgaccggtaaattcc 1570 Query: 100 ttacttttacaatacgaaaataattcataggtacgtaaatacaaatgtgaatcggttaat 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1569 ttacttttacaatacgaaaataattcataggtacgtaaatacaaatgtgaatcggttaat 1510 Query: 160 acaacaagatatattgtcgacattaggaaagtcacagaaaaatcttcaaggatagcgtac 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1509 acaacaagatatattgtcgacattaggaaagtcacagaaaaatcttcaaggatagcgtac 1450 Query: 220 actttcgaatacttacaatgcagaatgacaataaagaagaagtgccggctctggctgttt 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1449 actttcgaatacttacaatgcagaatgacaataaagaagaagtgccggctctggctgttt 1390 Query: 280 tactaggctcaaacgttaaaaattggccatattctgaggatacattggttcatgccctac 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1389 tactaggctcaaacgttaaaaattggccatattctgaggatacattggttcatgccctac 1330 Query: 340 aattaaggtctcaacaagaacaaacaaaaagacaatattataaactagagaatgtcaaca 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1329 aattaaggtctcaacaagaacaaacaaaaagacaatattataaactagagaatgtcaaca 1270 Query: 400 agactttagagatgttgaaaactgctgtgagtgctggcattccagtaaatctgatccctc 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 agactttagagatgttgaaaactgctgtgagtgctggcattccagtaaatctgatccctc 1210 Query: 460 aattattcaatagtgaccattctggtatggaaaccgaccctgcagatttacgtcatatga 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1209 aattattcaatagtgaccattctggtatggaaaccgaccctgcagatttacgtcatatga 1150 Query: 520 atcattctaaggagcaatctcccttattagcggtccctgacaagcagatgaaatcgtata 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 atcattctaaggagcaatctcccttattagcggtccctgacaagcagatgaaatcgtata 1090 Query: 580 agttccctcctgaaaaccagtctttgaggccgcctacaacaggtgctgaattgaaaactc 639 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 agttccctcctgaaaaccagtctttgaggccgcctacaacaggtgctgaattgaaaactc 1030 Query: 640 atcgaagaacacattctcccgctagaataggtgctgaagctgtggcagctcttaacagta 699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 atcgaagaacacattctcccgctagaataggtgctgaagctgtggcagctcttaacagta 970 Query: 700 gtatgggctcttaaagaaaaagaattgcatggtaatgatgatgaaaggcggaaaacgatt 759 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 gtat-ggctcttaaagaaaaagaattgcatggtaatgatgatgaaaggcggaaaacgatt 911 Query: 760 ggttctgaaaggcatatacattaagaaattgatgttcatgccccatcttcanaaattgaa 819 |||||||||||||||||||| ||||| | |||||| ||| |||||||||| ||| |||| Sbjct: 910 ggttctgaaaggcatataca-taagagaatgatgtcaatg-cccatcttcaaaaa-tgaa 854 Query: 820 cc-acgactgggagggttaaactttttcggcttggc 854 || |||||| |||| ||||||| ||||||||||||| Sbjct: 853 ccaacgact-ggagtgttaaac-ttttcggcttggc 820 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6947 Number of Sequences: 1807 Number of extensions: 6947 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)