BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZE05RM1.SCF screened BAC_end
         (947 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1320                                                        1461   0.0  

>3x_Contig1320 
          Length = 7350

 Score = 1461 bits (737), Expect = 0.0
 Identities = 803/816 (98%), Gaps = 7/816 (0%)
 Strand = Plus / Minus

                                                                        
Query: 40   acattacctcatctctctattttttgagcccatgctttgggtacttgaccggtaaattcc 99
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1629 acattacctcatctctctattttttgagcccatgctttgggtacttgaccggtaaattcc 1570

                                                                        
Query: 100  ttacttttacaatacgaaaataattcataggtacgtaaatacaaatgtgaatcggttaat 159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1569 ttacttttacaatacgaaaataattcataggtacgtaaatacaaatgtgaatcggttaat 1510

                                                                        
Query: 160  acaacaagatatattgtcgacattaggaaagtcacagaaaaatcttcaaggatagcgtac 219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 acaacaagatatattgtcgacattaggaaagtcacagaaaaatcttcaaggatagcgtac 1450

                                                                        
Query: 220  actttcgaatacttacaatgcagaatgacaataaagaagaagtgccggctctggctgttt 279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 actttcgaatacttacaatgcagaatgacaataaagaagaagtgccggctctggctgttt 1390

                                                                        
Query: 280  tactaggctcaaacgttaaaaattggccatattctgaggatacattggttcatgccctac 339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 tactaggctcaaacgttaaaaattggccatattctgaggatacattggttcatgccctac 1330

                                                                        
Query: 340  aattaaggtctcaacaagaacaaacaaaaagacaatattataaactagagaatgtcaaca 399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 aattaaggtctcaacaagaacaaacaaaaagacaatattataaactagagaatgtcaaca 1270

                                                                        
Query: 400  agactttagagatgttgaaaactgctgtgagtgctggcattccagtaaatctgatccctc 459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 agactttagagatgttgaaaactgctgtgagtgctggcattccagtaaatctgatccctc 1210

                                                                        
Query: 460  aattattcaatagtgaccattctggtatggaaaccgaccctgcagatttacgtcatatga 519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 aattattcaatagtgaccattctggtatggaaaccgaccctgcagatttacgtcatatga 1150

                                                                        
Query: 520  atcattctaaggagcaatctcccttattagcggtccctgacaagcagatgaaatcgtata 579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 atcattctaaggagcaatctcccttattagcggtccctgacaagcagatgaaatcgtata 1090

                                                                        
Query: 580  agttccctcctgaaaaccagtctttgaggccgcctacaacaggtgctgaattgaaaactc 639
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 agttccctcctgaaaaccagtctttgaggccgcctacaacaggtgctgaattgaaaactc 1030

                                                                        
Query: 640  atcgaagaacacattctcccgctagaataggtgctgaagctgtggcagctcttaacagta 699
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 atcgaagaacacattctcccgctagaataggtgctgaagctgtggcagctcttaacagta 970

                                                                        
Query: 700  gtatgggctcttaaagaaaaagaattgcatggtaatgatgatgaaaggcggaaaacgatt 759
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969  gtat-ggctcttaaagaaaaagaattgcatggtaatgatgatgaaaggcggaaaacgatt 911

                                                                        
Query: 760  ggttctgaaaggcatatacattaagaaattgatgttcatgccccatcttcanaaattgaa 819
            |||||||||||||||||||| ||||| | ||||||  ||| |||||||||| ||| ||||
Sbjct: 910  ggttctgaaaggcatataca-taagagaatgatgtcaatg-cccatcttcaaaaa-tgaa 854

                                                
Query: 820  cc-acgactgggagggttaaactttttcggcttggc 854
            || |||||| |||| ||||||| |||||||||||||
Sbjct: 853  ccaacgact-ggagtgttaaac-ttttcggcttggc 820


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6947
Number of Sequences: 1807
Number of extensions: 6947
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)