BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZE08FM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1487 1267 0.0 >3x_Contig1487 Length = 9002 Score = 1267 bits (639), Expect = 0.0 Identities = 714/735 (97%), Gaps = 3/735 (0%) Strand = Plus / Plus Query: 87 aggacctcactctcaatctgtggtaacaaaaaagtatcccagcaccgtcatattatgggg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 aggacctcactctcaatctgtggtaacaaaaaagtatcccagcaccgtcatattatgggg 1083 Query: 147 tccgataagagaccacagttgaagaaacagcagaccgaggatgagtccattttgagaggt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 tccgataagagaccacagttgaagaaacagcagaccgaggatgagtccattttgagaggt 1143 Query: 207 cggggagcaacaattaatccttctggatcatcaaatctcttcttcaggagttcatctgca 266 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 cggggagcaacaaagaatccttctggatcatcaaatctcttcttcaggagttcatctgca 1203 Query: 267 tcaaatttatttcggcttcgaaaatcatttgctaatggaggctcgagcagtagtagtaat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 tcaaatttatttcggcttcgaaaatcatttgctaatggaggctcgagcagtagtagtaat 1263 Query: 327 tctgctatggtattaaaatcaggacaatcgaagttgaagaacgaggacggtagtgaagtt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 tctgctatggtattaaaatcaggacaatcgaagttgaagaacgaggacggtagtgaagtt 1323 Query: 387 tcggatactcatcatatgatcgatgttcttccctcgtttgaaatgtataatgctttacat 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1324 tcggatactcatcatatgatcgatgttcttccctcgtttgaaatgtataatgctttacat 1383 Query: 447 cgcaacatcccacgaggaaatgtaaaccctgaccagcatgatttaccccccagctatcta 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 cgcaacatcccacgaggaaatgtaaaccctgaccagcatgatttaccccccagctatcta 1443 Query: 507 gaagtggagtcacagcggcaaacgcctgattcatctgacggtaccactgtctcccaactt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1444 gaagtggagtcacagcggcaaacgcctgattcatctgacggtaccactgtctcccaactt 1503 Query: 567 gatgaaatgttcctctccccatcgccttccttatacgatgccaacactcgcgttggatct 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 gatgaaatgttcctctccccatcgccttccttatacgatgccaacactcgcgttggatct 1563 Query: 627 tcacagagccttcaaagctttgatacagtatcctcaggggtgttacaaaacagtttacaa 686 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1564 tcacagagccttcaaagcttgaatacagtatcctcaggggtgttacaaaacagtttacaa 1623 Query: 687 gcgttgagtactagatatgaggcggatattgacgatttgggatgattcaaatattattaa 746 |||||||||||||||||||||||| ||||||||||| |||||||||| ||| ||| || Sbjct: 1624 gcgttgagtactagatatgaggcgataattgacgattt-ggatgattcagataatataaa 1682 Query: 747 gatcgagaagctttacttgttaccgaaagtgtgtaacactttttgacgttaatatttcaa 806 |||||||||||| |||| ||||||||| |||| ||||| | |||||||||||| ||| | Sbjct: 1683 gatcgagaagctatactcgttaccgaaggtgt-caacacctattgacgttaata-ttcga 1740 Query: 807 attcttaagagggct 821 |||||||||| |||| Sbjct: 1741 attcttaagaaggct 1755 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6551 Number of Sequences: 1807 Number of extensions: 6551 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)