BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZE08FM1.SCF screened BAC_end
         (951 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1487                                                        1267   0.0  

>3x_Contig1487 
          Length = 9002

 Score = 1267 bits (639), Expect = 0.0
 Identities = 714/735 (97%), Gaps = 3/735 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   aggacctcactctcaatctgtggtaacaaaaaagtatcccagcaccgtcatattatgggg 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 aggacctcactctcaatctgtggtaacaaaaaagtatcccagcaccgtcatattatgggg 1083

                                                                        
Query: 147  tccgataagagaccacagttgaagaaacagcagaccgaggatgagtccattttgagaggt 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 tccgataagagaccacagttgaagaaacagcagaccgaggatgagtccattttgagaggt 1143

                                                                        
Query: 207  cggggagcaacaattaatccttctggatcatcaaatctcttcttcaggagttcatctgca 266
            |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 cggggagcaacaaagaatccttctggatcatcaaatctcttcttcaggagttcatctgca 1203

                                                                        
Query: 267  tcaaatttatttcggcttcgaaaatcatttgctaatggaggctcgagcagtagtagtaat 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tcaaatttatttcggcttcgaaaatcatttgctaatggaggctcgagcagtagtagtaat 1263

                                                                        
Query: 327  tctgctatggtattaaaatcaggacaatcgaagttgaagaacgaggacggtagtgaagtt 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 tctgctatggtattaaaatcaggacaatcgaagttgaagaacgaggacggtagtgaagtt 1323

                                                                        
Query: 387  tcggatactcatcatatgatcgatgttcttccctcgtttgaaatgtataatgctttacat 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 tcggatactcatcatatgatcgatgttcttccctcgtttgaaatgtataatgctttacat 1383

                                                                        
Query: 447  cgcaacatcccacgaggaaatgtaaaccctgaccagcatgatttaccccccagctatcta 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 cgcaacatcccacgaggaaatgtaaaccctgaccagcatgatttaccccccagctatcta 1443

                                                                        
Query: 507  gaagtggagtcacagcggcaaacgcctgattcatctgacggtaccactgtctcccaactt 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 gaagtggagtcacagcggcaaacgcctgattcatctgacggtaccactgtctcccaactt 1503

                                                                        
Query: 567  gatgaaatgttcctctccccatcgccttccttatacgatgccaacactcgcgttggatct 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 gatgaaatgttcctctccccatcgccttccttatacgatgccaacactcgcgttggatct 1563

                                                                        
Query: 627  tcacagagccttcaaagctttgatacagtatcctcaggggtgttacaaaacagtttacaa 686
            ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 tcacagagccttcaaagcttgaatacagtatcctcaggggtgttacaaaacagtttacaa 1623

                                                                        
Query: 687  gcgttgagtactagatatgaggcggatattgacgatttgggatgattcaaatattattaa 746
            ||||||||||||||||||||||||   ||||||||||| |||||||||| ||| ||| ||
Sbjct: 1624 gcgttgagtactagatatgaggcgataattgacgattt-ggatgattcagataatataaa 1682

                                                                        
Query: 747  gatcgagaagctttacttgttaccgaaagtgtgtaacactttttgacgttaatatttcaa 806
            |||||||||||| |||| ||||||||| ||||  ||||| | |||||||||||| ||| |
Sbjct: 1683 gatcgagaagctatactcgttaccgaaggtgt-caacacctattgacgttaata-ttcga 1740

                           
Query: 807  attcttaagagggct 821
            |||||||||| ||||
Sbjct: 1741 attcttaagaaggct 1755


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6551
Number of Sequences: 1807
Number of extensions: 6551
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)