BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZE09FM1.SCF screened BAC_end (931 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1319 1267 0.0 >3x_Contig1319 Length = 7600 Score = 1267 bits (639), Expect = 0.0 Identities = 740/762 (97%), Gaps = 10/762 (1%) Strand = Plus / Plus Query: 85 tttaacttttttaaattttttttgtacccctcggtacctgcatgcctttctgccgcaata 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4314 tttaacttttttaaattttttttgtacccctcggtacctgcatgcctttctgccgcaata 4373 Query: 145 tctgcactaaacgacataaaaggaagaagaccgttttttgtggcaagtacgacgaaacaa 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4374 tctgcactaaacgacataaaaggaagaagaccgttttttgtggcaagtacgacgaaacaa 4433 Query: 205 gtgaaaaggcattatgtaactaagggaactgggtcaattcgtatagtaagtcatgctcta 264 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4434 gtgaaaaggcattaggtaactaagggaactgggtcaattcgtatagtaagtcatgctcta 4493 Query: 265 gaagatttacgggctgctggaaatgtcaacattctagaacttcgccgcagtcccaaaaaa 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4494 gaagatttacgggctgctggaaatgtcaacattctagaacttcgccgcagtcccaaaaaa 4553 Query: 325 aaaaggcgtaatggtaattgaagaagaaaatcttcttggagatcccttgtacgcaggatt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4554 aaaaggcgtaatggtaattgaagaagaaaatcttcttggagatcccttgtacgcaggatt 4613 Query: 385 ggacaagaactttaaggaattggagctgcctatttttccttttttttcacctctaagtgg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4614 ggacaagaactttaaggaattggagctgcctatttttccttttttttcacctctaagtgg 4673 Query: 445 catggaaatcagtgtactgtgagctatttcattacgtgcaaacggaaagcggtgcccttt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4674 catggaaatcagtgtactgtgagctatttcattacgtgcaaacggaaagcggtgcccttt 4733 Query: 505 tcgaatctacgggttaagtccgccccccgcacccctctctctccctcaggctcctttttt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4734 tcgaatctacgggttaagtccgccccccgcacccctctctctccctcaggctcctttttt 4793 Query: 565 tgagtcgtacgacatgtcaaaacggatacaaaaatggcaaacgactaatttttctagcaa 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4794 tgagtcgtacgacatgtcaaaacggatacaaaaatggcaaacgactaatttttctagcaa 4853 Query: 625 gaatatgtttccgcattagtatgtgtcaatatcagttgacagaacctatataagttttct 684 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4854 gaatatgtttccgcattagtatgtgtcaatatcagttgacagaacctatataagtattct 4913 Query: 685 gtggcatttcaggatgggtttttttttttcagtgtaaagcctttttaaagaattaacatt 744 ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 4914 gtggcatttcaggat-ggtttttttttttcagtgtaaagccttttagaagaa-taaca-t 4970 Query: 745 ttccaatggcaggtaccctagggggagttctgcaccaaccgagatttggagaccggttta 804 |||||||||||||||| | |||||| ||||| ||| |||||||| |||| ||| ||| Sbjct: 4971 atccaatggcaggtacctaa--gggagtactgcaacaa-cgagattt-gagaacggatta 5026 Query: 805 ccagcaatttcggttccgataagctaaggaatggggtatttt 846 |||||| ||||||| ||||||||||||||||||| |||||| Sbjct: 5027 -cagcaa-ttcggtt-cgataagctaaggaatgggatatttt 5065 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,771 Number of Sequences: 1807 Number of extensions: 13771 Number of successful extensions: 90 Number of sequences better than 1.0e-20: 1 length of query: 931 length of database: 10,358,551 effective HSP length: 16 effective length of query: 915 effective length of database: 10,329,639 effective search space: 9451619685 effective search space used: 9451619685 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)