BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZE09FM1.SCF screened BAC_end
         (931 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1319                                                        1267   0.0  

>3x_Contig1319 
          Length = 7600

 Score = 1267 bits (639), Expect = 0.0
 Identities = 740/762 (97%), Gaps = 10/762 (1%)
 Strand = Plus / Plus

                                                                        
Query: 85   tttaacttttttaaattttttttgtacccctcggtacctgcatgcctttctgccgcaata 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4314 tttaacttttttaaattttttttgtacccctcggtacctgcatgcctttctgccgcaata 4373

                                                                        
Query: 145  tctgcactaaacgacataaaaggaagaagaccgttttttgtggcaagtacgacgaaacaa 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4374 tctgcactaaacgacataaaaggaagaagaccgttttttgtggcaagtacgacgaaacaa 4433

                                                                        
Query: 205  gtgaaaaggcattatgtaactaagggaactgggtcaattcgtatagtaagtcatgctcta 264
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4434 gtgaaaaggcattaggtaactaagggaactgggtcaattcgtatagtaagtcatgctcta 4493

                                                                        
Query: 265  gaagatttacgggctgctggaaatgtcaacattctagaacttcgccgcagtcccaaaaaa 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4494 gaagatttacgggctgctggaaatgtcaacattctagaacttcgccgcagtcccaaaaaa 4553

                                                                        
Query: 325  aaaaggcgtaatggtaattgaagaagaaaatcttcttggagatcccttgtacgcaggatt 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4554 aaaaggcgtaatggtaattgaagaagaaaatcttcttggagatcccttgtacgcaggatt 4613

                                                                        
Query: 385  ggacaagaactttaaggaattggagctgcctatttttccttttttttcacctctaagtgg 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4614 ggacaagaactttaaggaattggagctgcctatttttccttttttttcacctctaagtgg 4673

                                                                        
Query: 445  catggaaatcagtgtactgtgagctatttcattacgtgcaaacggaaagcggtgcccttt 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4674 catggaaatcagtgtactgtgagctatttcattacgtgcaaacggaaagcggtgcccttt 4733

                                                                        
Query: 505  tcgaatctacgggttaagtccgccccccgcacccctctctctccctcaggctcctttttt 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4734 tcgaatctacgggttaagtccgccccccgcacccctctctctccctcaggctcctttttt 4793

                                                                        
Query: 565  tgagtcgtacgacatgtcaaaacggatacaaaaatggcaaacgactaatttttctagcaa 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4794 tgagtcgtacgacatgtcaaaacggatacaaaaatggcaaacgactaatttttctagcaa 4853

                                                                        
Query: 625  gaatatgtttccgcattagtatgtgtcaatatcagttgacagaacctatataagttttct 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4854 gaatatgtttccgcattagtatgtgtcaatatcagttgacagaacctatataagtattct 4913

                                                                        
Query: 685  gtggcatttcaggatgggtttttttttttcagtgtaaagcctttttaaagaattaacatt 744
            ||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||||| |
Sbjct: 4914 gtggcatttcaggat-ggtttttttttttcagtgtaaagccttttagaagaa-taaca-t 4970

                                                                        
Query: 745  ttccaatggcaggtaccctagggggagttctgcaccaaccgagatttggagaccggttta 804
             ||||||||||||||||  |  |||||| ||||| ||| |||||||| |||| ||| |||
Sbjct: 4971 atccaatggcaggtacctaa--gggagtactgcaacaa-cgagattt-gagaacggatta 5026

                                                      
Query: 805  ccagcaatttcggttccgataagctaaggaatggggtatttt 846
             |||||| ||||||| ||||||||||||||||||| ||||||
Sbjct: 5027 -cagcaa-ttcggtt-cgataagctaaggaatgggatatttt 5065


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,771
Number of Sequences: 1807
Number of extensions: 13771
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 931
length of database: 10,358,551
effective HSP length: 16
effective length of query: 915
effective length of database: 10,329,639
effective search space: 9451619685
effective search space used: 9451619685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)