BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZE11FM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1659 1269 0.0 >3x_Contig1659 Length = 17570 Score = 1269 bits (640), Expect = 0.0 Identities = 744/770 (96%), Gaps = 8/770 (1%) Strand = Plus / Plus Query: 87 caccttcctttggatgaactctcatgatcaagttcttacctggagctagagtagtcaaac 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 caccttcctttggatgaactctcatgatcaagttcttacctggagctagagtagtcaaac 385 Query: 147 ccaagatgtcgatggtgtcatctgggttgatcttgtcgtaagcagctggttcagcaaagt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 ccaagatgtcgatggtgtcatctgggttgatcttgtcgtaagcagctggttcagcaaagt 445 Query: 207 tcaaaggcaacatatccttgtttcttcaagttagtttcgtgaattcttgcgaaggatttg 266 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 tcaaaggcaacata-ccttgtttcttcaagttagtttcgtgaattcttgcgaaggatttg 504 Query: 267 gtaataatagcgaaaccacccaagaatcttggttccaaggcagcgtgttcacgagaagaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 gtaataatagcgaaaccacccaagaatcttggttccaaggcagcgtgttcacgagaagaa 564 Query: 327 ccttcaccgaagttttcaccaccaatgacaacccatctgatacctgcatctctgtaagct 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 ccttcaccgaagttttcaccaccaatgacaacccatctgatacctgcatctctgtaagct 624 Query: 387 ctagcagtgtctggaacaccggcgtattcaccagtgtagtggtgcttgacacagttagcc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 ctagcagtgtctggaacaccggcgtattcaccagtgtagtggtgcttgacacagttagcc 684 Query: 447 ttcttgttttcagcgttaatagcaccaatcatatagttgtttgaaatgttntccaaatga 506 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 685 ttcttgttttcagcgttaatagcaccaatcatatagttgtttgaaatgttttccaaatga 744 Query: 507 cctctgtactttaaccatggaccagccatagagatatggtcagtggtggtcttacctaga 566 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 cctctgtacttcaaccatggaccagccatagagatatggtcagtggtggtcttacctaga 804 Query: 567 gatttgatcaagattggcatatcgaaagcatccttaccatcccaagccttgaaaggtttc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 gatttgatcaagattggcatatcgaaagcatccttaccatcccaagccttgaaaggtttc 864 Query: 627 aacaattgtagacggtcagacgttggagaaacttggacagtaacggaagaacggtccttt 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 aacaattgtagacggtcagacgttggagaaacttggacagtaacggaagaacggtccttt 924 Query: 687 ggtggagcttggtaagtgttttcaccttggttcgtaacccttaacttgcaaaccaacacc 746 |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 925 ggtggagcttggtaagtgttttcacc-tgggtcgtaacccttaactggcaaaccaacacc 983 Query: 747 cgttggttggtttcaacattaatttcggtacccgcctttgtccttaaaatggccggtttg 806 ||||| |||||||||||| || |||| || ||| | |||||||| ||| | ||||| Sbjct: 984 agttgg-tggtttcaacatgaa-ttcgtta-ccgtccttgtccttcaaagtgtcggtt-- 1038 Query: 807 agaggtttaaatttcaaattaccaacattggcgaaagccggtagtgattt 856 ||||| |||||| |||||| |||| || ||||||||| |||||||||||| Sbjct: 1039 agagggttaaatctcaaatcaccagcaatggcgaaag-cggtagtgattt 1087 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6461 Number of Sequences: 1807 Number of extensions: 6461 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)