BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZE11FM1.SCF screened BAC_end
         (951 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1659                                                        1269   0.0  

>3x_Contig1659 
          Length = 17570

 Score = 1269 bits (640), Expect = 0.0
 Identities = 744/770 (96%), Gaps = 8/770 (1%)
 Strand = Plus / Plus

                                                                        
Query: 87   caccttcctttggatgaactctcatgatcaagttcttacctggagctagagtagtcaaac 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326  caccttcctttggatgaactctcatgatcaagttcttacctggagctagagtagtcaaac 385

                                                                        
Query: 147  ccaagatgtcgatggtgtcatctgggttgatcttgtcgtaagcagctggttcagcaaagt 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386  ccaagatgtcgatggtgtcatctgggttgatcttgtcgtaagcagctggttcagcaaagt 445

                                                                        
Query: 207  tcaaaggcaacatatccttgtttcttcaagttagtttcgtgaattcttgcgaaggatttg 266
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446  tcaaaggcaacata-ccttgtttcttcaagttagtttcgtgaattcttgcgaaggatttg 504

                                                                        
Query: 267  gtaataatagcgaaaccacccaagaatcttggttccaaggcagcgtgttcacgagaagaa 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505  gtaataatagcgaaaccacccaagaatcttggttccaaggcagcgtgttcacgagaagaa 564

                                                                        
Query: 327  ccttcaccgaagttttcaccaccaatgacaacccatctgatacctgcatctctgtaagct 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565  ccttcaccgaagttttcaccaccaatgacaacccatctgatacctgcatctctgtaagct 624

                                                                        
Query: 387  ctagcagtgtctggaacaccggcgtattcaccagtgtagtggtgcttgacacagttagcc 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625  ctagcagtgtctggaacaccggcgtattcaccagtgtagtggtgcttgacacagttagcc 684

                                                                        
Query: 447  ttcttgttttcagcgttaatagcaccaatcatatagttgtttgaaatgttntccaaatga 506
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 685  ttcttgttttcagcgttaatagcaccaatcatatagttgtttgaaatgttttccaaatga 744

                                                                        
Query: 507  cctctgtactttaaccatggaccagccatagagatatggtcagtggtggtcttacctaga 566
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745  cctctgtacttcaaccatggaccagccatagagatatggtcagtggtggtcttacctaga 804

                                                                        
Query: 567  gatttgatcaagattggcatatcgaaagcatccttaccatcccaagccttgaaaggtttc 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805  gatttgatcaagattggcatatcgaaagcatccttaccatcccaagccttgaaaggtttc 864

                                                                        
Query: 627  aacaattgtagacggtcagacgttggagaaacttggacagtaacggaagaacggtccttt 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865  aacaattgtagacggtcagacgttggagaaacttggacagtaacggaagaacggtccttt 924

                                                                        
Query: 687  ggtggagcttggtaagtgttttcaccttggttcgtaacccttaacttgcaaaccaacacc 746
            |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||
Sbjct: 925  ggtggagcttggtaagtgttttcacc-tgggtcgtaacccttaactggcaaaccaacacc 983

                                                                        
Query: 747  cgttggttggtttcaacattaatttcggtacccgcctttgtccttaaaatggccggtttg 806
             ||||| |||||||||||| || |||| || ||| | |||||||| |||  | |||||  
Sbjct: 984  agttgg-tggtttcaacatgaa-ttcgtta-ccgtccttgtccttcaaagtgtcggtt-- 1038

                                                              
Query: 807  agaggtttaaatttcaaattaccaacattggcgaaagccggtagtgattt 856
            ||||| |||||| |||||| |||| || ||||||||| ||||||||||||
Sbjct: 1039 agagggttaaatctcaaatcaccagcaatggcgaaag-cggtagtgattt 1087


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6461
Number of Sequences: 1807
Number of extensions: 6461
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 951
length of database: 10,358,551
effective HSP length: 16
effective length of query: 935
effective length of database: 10,329,639
effective search space: 9658212465
effective search space used: 9658212465
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)