BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZF02RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1717 1223 0.0 >3x_Contig1717 Length = 18389 Score = 1223 bits (617), Expect = 0.0 Identities = 689/709 (97%), Gaps = 3/709 (0%) Strand = Plus / Minus Query: 48 agacacgatagaccaatctggttgaggtttcttaccacgacacaagttagataaagtcca 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13980 agacacgatagaccaatctggttgaggtttcttaccacgacacaagttagataaagtcca 13921 Query: 108 cgtagctgttctaatcaaggaagtcttgttcaattcgaacaaatatagaattggttgcat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13920 cgtagctgttctaatcaaggaagtcttgttcaattcgaacaaatatagaattggttgcat 13861 Query: 168 ggcaccacattgcaaaacgtagtctctataatcggtggaatcaccagcaactttacccaa 227 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 13860 ggcaccacattgcaaaacgtagtctctataatcggtggaatcaccagcaacgttacccaa 13801 Query: 228 ggcccaaatagcttgttccttcacttcaaccgagtttgaatataataattgaatgaataa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13800 ggcccaaatagcttgttccttcacttcaaccgagtttgaatataataattgaatgaataa 13741 Query: 288 tggcacagcacccgcatctacgacgactctagtctgctcagaagtaccagaagcaatgtt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13740 tggcacagcacccgcatctacgacgactctagtctgctcagaagtaccagaagcaatgtt 13681 Query: 348 cgtcaacgcccaagcagcttccaattgcaacatctcaggttgattttcgctcatgaattg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13680 cgtcaacgcccaagcagcttccaattgcaacatctcaggttgattttcgctcatgaattg 13621 Query: 408 gaccaaggttggcactacgccagtactgataaccaaatcgataggtggtctgtgttctct 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13620 gaccaaggttggcactacgccagtactgataaccaaatcgataggtggtctgtgttctct 13561 Query: 468 agacaagacttgtctaaacttgaccgtcacagccaactgttgttgtagatcgttagaatg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13560 agacaagacttgtctaaacttgaccgtcacagccaactgttgttgtagatcgttagaatg 13501 Query: 528 gatttgttcc-acatagcaagcaactcctgttgtaattgtctgtagaaagaggagtcctg 586 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 13500 gatttgttccaacatagcaggcaactcctgttgtaattgtctgtagaaagaggagtcctg 13441 Query: 587 atcgtcatcatcattattttcatcattagaatcgttaccaacaggcgcatttgaaatttc 646 |||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| Sbjct: 13440 atcgtcatcatcatcattttcatcatcagaatcgttaccaacaggcgca-ttgaaatttc 13382 Query: 647 ttctttttggtaatgcctcaatccttttgaactttcttaactggacttgttgaacgtttt 706 ||||||||| |||||||||| ||| |||| ||||| |||| |||||||||||||| | Sbjct: 13381 ttctttttgctaatgcctcatccctcttgacttttctcaactcgacttgttgaacgtctc 13322 Query: 707 tacgaacacgtaatttatcagcaga-aatctacccttattcttgaagtt 754 ||||| |||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 13321 tacgacgacgtaattcatcagcagagaatctacccttattcttgaagtt 13273 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,651 Number of Sequences: 1807 Number of extensions: 12651 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)