BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZF03FM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1774 1122 0.0 >3x_Contig1774 Length = 27771 Score = 1122 bits (566), Expect = 0.0 Identities = 670/698 (95%), Gaps = 5/698 (0%) Strand = Plus / Minus Query: 91 atcttgcctt-aatatacttgtccatcttccagtttgacaattatgttttaatgttagtt 149 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24204 atcttgccttcaatatacttgtccatcttccagtttgacaattatgttttaatgttagtt 24145 Query: 150 ttggttgaagatcttccggaagtgttccactgacatcaaataatctaattgtgtcatcgt 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24144 ttggttgaagatcttccggaagtgttccactgacatcaaataatctaattgtgtcatcgt 24085 Query: 210 atccattgctttctaatgtttcatccatcggagaatatgatactgcggagacacttaatc 269 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24084 atccattgcaaactaatgtttcatccatcggagaatatgatactgcggagacacttaatc 24025 Query: 270 tagaatcatatgtagcaacaatttcatgggatgcgaagtcttcgtattgtgaccactctg 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24024 tagaatcatatgtagcaacaatttcatgggatgcgaagtcttcgtattgtgaccactctg 23965 Query: 330 gtttattgacaatttttcttgtatcccatattttaagtgttctatctaatgatccggtcg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23964 gtttattgacaatttttcttgtatcccatattttaagtgttctatctaatgatccggtcg 23905 Query: 390 ctatttcatagggccgcttagggtttatgctgaaggaaccgatttttttgtctgacaatc 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23904 ctatttcatagggccgcttagggtttatgctgaaggaaccgatttttttgtctgacaatc 23845 Query: 450 ttttcaaattaatttctgttggtttggtacgaacgtcaaacgtagtgaattcgccgctca 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23844 ttttcaaattaatttctgttggtttggtacgaacgtcaaacgtagtgaattcgccgctca 23785 Query: 510 atgtcgtcatgatttaggacgttcggatcattatagttgaattgaaaatcacttatccct 569 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23784 atgtcgtcatga-ataagacgttcggatcattatagttgaattgaaaatcacttatccct 23726 Query: 570 aatggatcatcatactcattcttttacactagtatttcttcactgttcatattttgtaga 629 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 23725 aatggatcatcatactcattctttaacactagtatttcttcactgttcatatcttgtaga 23666 Query: 630 ttaattgatctt-aatatccatcgtatgaagctgctagtaacctacttgtattcgtggcg 688 |||||||||||| |||||||||||||||| ||||||||||||||||| ||| ||||||| Sbjct: 23665 ttaattgatcttaaatatccatcgtatgaggctgctagtaacctactgctatccgtggcg 23606 Query: 689 tatgttgtaaattcttccttccttttttggtaataatttcactttaataatatcaggctc 748 |||| ||| |||||||||| | ||||| | ||||||||||||||| ||||||||||||| Sbjct: 23605 tatg-tgtcaattcttcctacatttttggtaaataatttcactttagtaatatcaggctc 23547 Query: 749 ct-ttattcatcctcagggtgaattttacgaactttcc 785 || | ||||||||||||| ||| ||| |||||| |||| Sbjct: 23546 ctctaattcatcctcaggttgagtttcacgaacgttcc 23509 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7148 Number of Sequences: 1807 Number of extensions: 7148 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)