BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZF06FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1590 1394 0.0 >3x_Contig1590 Length = 13653 Score = 1394 bits (703), Expect = 0.0 Identities = 736/745 (98%), Gaps = 3/745 (0%) Strand = Plus / Plus Query: 86 taattcgatcgaacttatactttcttcactgttaaaaccatgtatcactttaaaattttt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3807 taattcgatcgaacttatactttcttcactgttaaaaccatgtatcactttaaaattttt 3866 Query: 146 caacattcgtcaaaagctttgaagcttcgaaaactgaaatccagttacagcttttatgat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3867 caacattcgtcaaaagctttgaagcttcgaaaactgaaatccagttacagcttttatgat 3926 Query: 206 agaagcggtaaatgaagataaactgtcgcgagtagttaagtattcagtggaaggcgaccc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3927 agaagcggtaaatgaagataaactgtcgcgagtagttaagtattcagtggaaggcgaccc 3986 Query: 266 aaggcgattttcgatttaggaagtaaaccgatatacttacggaaaattaagtaaggctta 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3987 aaggcgattttcgatttaggaagtaaaccgatatacttacggaaaattaagtaaggctta 4046 Query: 326 tcaagacatcaaaaggaaaacaatggggaagagtagtaaagataaacgtgatctgtacta 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4047 tcaagacatcaaaaggaaaacaatggggaagagtagtaaagataaacgtgatctgtacta 4106 Query: 386 cagaaaggctaaggaacaaggataccgtgcgagatccgctttcaagttattacagttaga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4107 cagaaaggctaaggaacaaggataccgtgcgagatccgctttcaagttattacagttaga 4166 Query: 446 cgacgactttcattttttgcagcaggctgtacgagtggtggacctttgcgctgctccggg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4167 cgacgactttcattttttgcagcaggctgtacgagtggtggacctttgcgctgctccggg 4226 Query: 506 atcttggtctcaggtcttgtctagaagactatttcctcagagttcagataattcagatag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4227 atcttggtctcaggtcttgtctagaagactatttcctcagagttcagataattcagatag 4286 Query: 566 aaagattgttgcagttgatttgcagcccatgtcaccgatcgataatgtaatcacattaca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4287 aaagattgttgcagttgatttgcagcccatgtcaccgatcgataatgtaatcacattaca 4346 Query: 626 ggcggatattacacatcctaaaactctacaaaccataaccgagcttttngagggtaagaa 685 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4347 ggcggatattacacatcctaaaactctacaaaccataaccgagctttttgagggtaagaa 4406 Query: 686 agctgattttatttgtagcgatggtgcgccagatgtcaccgggttacacgatttagacga 745 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4407 agctgattttatttgtagcgatggtgcgccagatgtcaccggtttacacgatttagacga 4466 Query: 746 gtttgttcaacagcagtttaattttaggcgcattacagctatttacctgtttgtttagaa 805 || ||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||| Sbjct: 4467 gtatgttcaacagcag-ttaattttaagcgcattacagctatctacctgtttgttaagaa 4525 Query: 806 aaggtggaaaatttttgttgccaaa 830 |||||||||| ||||||||||||| Sbjct: 4526 aaggtggaaa--ttttgttgccaaa 4548 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7236 Number of Sequences: 1807 Number of extensions: 7236 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)