BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC30ZF07FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1295 882 0.0 >3x_Contig1295 Length = 7117 Score = 882 bits (445), Expect = 0.0 Identities = 467/472 (98%), Gaps = 2/472 (0%) Strand = Plus / Plus Query: 87 atcagctgtcattactttctgctcggtcagcattgatgaaaacccggctcatatctcatt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 atcagctgtcattactttctgctcggtcagcattgatgaaaacccggctcatatctcatt 945 Query: 147 aacttcgcctcgctcctaatgtaaagatatatacctaagaaataataaggaatgataagt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 aacttcgcctcgctcctaatgtaaagatatatacctaagaaataataaggaatgataagt 1005 Query: 207 gaatctatccaaaaacctggtccaactattcttcaacctagttttctttcactgtgtgag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 gaatctatccaaaaacctggtccaactattcttcaacctagttttctttcactgtgtgag 1065 Query: 267 tcacactattataccaaatacccatatgtaagttacatcttttttcagtgtcactatcaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 tcacactattataccaaatacccatatgtaagttacatcttttttcagtgtcactatcaa 1125 Query: 327 aactcctgtattgttatccataaactttagaaatacagtacagtgcgtatcccgatgtag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1126 aactcctgtattgttatccataaactttagaaatacagtacagtgcgtatcccgatgtag 1185 Query: 387 acagaatttccggtactctacctccaacttaatgccatatgcctgcgtatcgtgacgctt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1186 acagaatttccggtactctacctccaacttaatgccatatgcctgcgtatcgtgacgctt 1245 Query: 447 tcgaccgaaatgaatttcgggataatagctacatacatatatacatctcatatcttccac 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1246 tcgaccgaaatgaatttcgggataatagctacatacatatatacatctcatatcttccac 1305 Query: 507 cgaacanagttggagattgttaaactcccagtttcgtcactcggaccttttt 558 |||||| ||||||||||||| ||||||||| |||||||||||||| ||||| Sbjct: 1306 cgaacaaggttggagattgtt-aactcccag-ttcgtcactcggactttttt 1355 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 63,767 Number of Sequences: 1807 Number of extensions: 63767 Number of successful extensions: 8754 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)