BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC30ZF11RM1.SCF screened BAC_end
         (936 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1451                                                        1453   0.0  

>3x_Contig1451 
          Length = 8346

 Score = 1453 bits (733), Expect = 0.0
 Identities = 799/816 (97%), Gaps = 5/816 (0%)
 Strand = Plus / Minus

                                                                        
Query: 48   tcttatacttttaggactttgtgatggaaatacatttgacatagaaaacactaaaccaaa 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6947 tcttatacttttaggactttgtgatggaaatacatttgacatagaaaacactaaaccaaa 6888

                                                                        
Query: 108  taaaaacttaaacacaataacatgacatgattgttgatatatgagagtatgtttcttgtc 167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6887 taaaaacttaaacacaataacatgacatgattgttgatatatgagagtatgtttcttgtc 6828

                                                                        
Query: 168  aacagttttctttctgaatcaatatatacacatactacatagttttaccttttacgactt 227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6827 aacagttttctttctgaatcaatatatacacatactacatagttttaccttttacgactt 6768

                                                                        
Query: 228  atattgcataattaaaccccataataataaacaaataccattgacatgacagataatatt 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6767 atattgcataattaaaccccataataataaacaaataccattgacatgacagataatatt 6708

                                                                        
Query: 288  tttttatttcccacatgtcgttcctaacacgcagctacatgacagtatcgaacttcgaat 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6707 tttttatttcccacatgtcgttcctaacacgcagctacatgacagtatcgaacttcgaat 6648

                                                                        
Query: 348  gtgatcgcaaaccaacgtgcttgtgaccagctgcatgcaagcaaatgacgatgatgataa 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6647 gtgatcgcaaaccaacgtgcttgtgaccagctgcatgcaagcaaatgacgatgatgataa 6588

                                                                        
Query: 408  aagttgtgtcggacgacaaagcttcagtgtcaccggatttggttcagttattatttttca 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6587 aagttgtgtcggacgacaaagcttcagtgtcaccggatttggttcagttattatttttca 6528

                                                                        
Query: 468  ttggatatggaaacttcggagttgagtggtccgttcccgtctcggatgattgtggtccga 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6527 ttggatatggaaacttcggagttgagtggtccgttcccgtctcggatgattgtggtccga 6468

                                                                        
Query: 528  tggacaagctgattcgaaggccctttcgttctctttacggcaggttagcaaggccgtaag 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6467 tggacaagctgattcgaaggccctttcgttctctttacggcaggttagcaaggccgtaag 6408

                                                                        
Query: 588  ctcatcgcttgggtatgtccacgagctacactctctgtacggatagttttctagcaccgt 647
            |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 6407 ctcatcgcttgggtatgtccacgagctacactctctgtacggatagtttcttagcaccgt 6348

                                                                        
Query: 648  caacaagattaaggaactgaatggtgtattgtttcattatggtacaggattgcaccggag 707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6347 caacaagattaaggaactgaatggtgtattgtttcattatggtacaggattgcaccggag 6288

                                                                        
Query: 708  cactgtatttgtggagctacttgtgctaacagcaccagagtgcccaatttattttatcaa 767
            ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||
Sbjct: 6287 cactgtatttgtggagctacttgtgctaacagcacgagagt-cccaatttatttcatcaa 6229

                                                                        
Query: 768  gtaggtttagctgcaaatatttaagttaaagctgtagatgggaggatagactttgtcttt 827
            ||| |||||||||| ||||| |||  ||||||||||||| ||||||||||| ||||| ||
Sbjct: 6228 gtaagtttagctgcgaatatataaagtaaagctgtagat-ggaggatagac-ttgtcatt 6171

                                                
Query: 828  cgagaatttggttttgaattggattcatttgcgaat 863
            ||||||||  | ||||||||||||||| ||||||||
Sbjct: 6170 cgagaatt--ggtttgaattggattcagttgcgaat 6137


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7205
Number of Sequences: 1807
Number of extensions: 7205
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)